Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58698g00001 GCAACAGGAAACCTTGAAGCCATAGTTCTGCGGCGTTATCCAGAAAATATTGACAAAATACAAGCAATGTCAACATTGAGGGCTGAAGCTTTAGCGCAAATGAGTCGCCTTAAATTGCTCATGCTGTGGAATTTGAATTTCTCAGGAAGTCTCAATTTTCTTTCAAGTGAATTGGGGTATTTATGTTGGGATAAATATCCTTTCACTTGTTTACCATCAAATTTTGAGCCGAATAAACTTGTTGAACTGATCCTACCGCATAGCAACATCAGACAACTATGGGAGGGCACAAAGGTACTATAA 303 0.3894 ATGNLEAIVLRRYPENIDKIQAMSTLRAEALAQMSRLKLLMLWNLNFSGSLNFLSSELGYLCWDKYPFTCLPSNFEPNKLVELILPHSNIRQLWEGTKVL 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58698g00001 100 SUPERFAMILY L domain-like 25 96 - -
Trme58698g00001 100 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 31 93 IPR044974 GO:0006952
Trme58698g00001 100 Pfam Leucine Rich Repeat 79 98 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58698g00001 Trme-Chr58698 95 397 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58698g00001 33 98 WRKY Transcription Factor Family AT4G12020 39.189 1.09e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58698g00001 - - tpra:123922646 158.688