Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58627g00001 AATGAAAGTGCAGATATCAAGAATATTGTTGAACATGTCACCCGTTTGCTCGATAGGACCGAGTTATTTGTTGCTGAACATCCGGTGGGTGTAGAATCTCGTGTGGAAGCTGCGACTAAGCTACTAAACATCCAAAAATCAGATGTTTTACTTCTAGGGATATGGGGAATGGGCGGTGTGGGTAAAACAACCATTGCCAAATCCATTTATAATCAAATTGGGAGCAAATTTGAGGGAAGGAGCTTCATTCTGAATATAAGAGAATTTTGGGAGACAAATAATAATCTAGTTTCTCTACAGCAACAGGTACTTTGTGATGTTTACAGAACTACGACATTCAAGATACGCGACATAGAATCAGGGAAAAATATATTCAAGGAACGACTTGCCCAGAATAGGGTACTTGTTGTGCTTGATGATGTGAATGAATTGGACCAAGTAAAGGCTTTGTGTGGAAGCCGCAAATG 467 0.3983 NESADIKNIVEHVTRLLDRTELFVAEHPVGVESRVEAATKLLNIQKSDVLLLGIWGMGGVGKTTIAKSIYNQIGSKFEGRSFILNIREFWETNNNLVSLQQQVLCDVYRTTTFKIRDIESGKNIFKERLAQNRVLVVLDDVNELDQVKALCGSRK 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58627g00001 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 151 IPR027417 -
Trme58627g00001 155 Gene3D - 8 155 IPR027417 -
Trme58627g00001 155 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 152 IPR044974 GO:0006952
Trme58627g00001 155 Pfam NB-ARC domain 35 146 IPR002182 GO:0043531
Trme58627g00001 155 PRINTS Disease resistance protein signature 128 142 - -
Trme58627g00001 155 PRINTS Disease resistance protein signature 51 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58627g00001 Trme-Chr58627 60 526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58627g00001 29 152 WRKY Transcription Factor Family AT5G45050 32.031 1.53e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58627g00001 - - mtr:11411578 262.692