Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58588g00001 AGTGAACATCATGGGCCTATGGTTGCTGTCATCGAATGCCCAGATGTTCAACTATTAAAACAAGGCATTCGAGTTCTAGATGATTTTCCATGCCTGAGTATTCCTTCTAATGCACGTGATAGTCAATATCAGATACTTGGATGGCAACAAGTTGCTGCTAAACTTGGAATGCAACGTTGTGCGGCATCGGTCCAGTGGCTAAATGAGAGAATTGCTCTATCCAGATATGCCCATGTACACCACACTGAATAA 252 0.4286 SEHHGPMVAVIECPDVQLLKQGIRVLDDFPCLSIPSNARDSQYQILGWQQVAAKLGMQRCAASVQWLNERIALSRYAHVHHTE 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58588g00001 83 Pfam Domain of unknown function (DUF1744) 2 79 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Trme58588g00001 83 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 2 79 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58588g00001 2 79 Core DNA Replication Machinery Family AT1G08260 60.256 4.00e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58588g00001 K02324 - gmx:100812003 142.51