Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme585869g00001 ATGATATCTGGAACTAGCATGTCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAGCATCCACATTGGAGCCCTGCTGCCATTAAATCAGCATTGATGACAACATCAACAACTCTAGATAGAGCAGGGAATCCTCTTCTAGCACAGCAAACTTCTGAAACAGAAGCTATTAAGTTTGTCAAAGCTACCCCTTTTGACTATGGGAGTGGACATGTTGATCCAACAGCTGCCTTGGACCC 248 0.4395 MISGTSMSAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQQTSETEAIKFVKATPFDYGSGHVDPTAALDP 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme585869g00001 83 ProSitePatterns Serine proteases, subtilase family, serine active site. 4 14 IPR023828 -
Trme585869g00001 83 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 83 IPR045051 -
Trme585869g00001 83 SUPERFAMILY Subtilisin-like 2 82 IPR036852 GO:0004252|GO:0006508
Trme585869g00001 83 ProSiteProfiles Serine proteases, subtilase domain profile. 1 81 - -
Trme585869g00001 83 Gene3D Peptidase S8/S53 domain 1 83 IPR036852 GO:0004252|GO:0006508
Trme585869g00001 83 Pfam Subtilase family 2 45 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme585869g00001 Trme-Chr585869 1 248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme585869g00001 1 83 Subtilisin-like Serine Gene Family AT4G30020 81.928 2.99e-42 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme585869g00001 - - tpra:123910073 168.703