Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58582g00001 ATGAGAAGACTCAGATGTATGAAAGCTGTTGTTGTATTGGATAGTTTGAATTCTTCAAAACTTTTAGAAAACTTGATTGGTGTCGGTCGTGGTTGGTTAAGAGGCGGAAGCACAGTCATTGTGACAACGAGGAACAAAGATGTGCTTATAAGTGGAGGAGTTGATGAGATTTATGAAGTCCAGAAAATGAACTTTCAAAACTCCCTTAGACTTTTCAGCTTAAATGCTTTTAATAAACCTCAAGCTAAACAAGGATACGAGGAGGTATCAAAAAGAGCAGTTGTTTATGCCAAAGGTATTCCTTTAGTTTTGAAAGTTTTAGGATCATTTCTACATTCCAAAAGTAAAGAAGAATGGGATAGTGCACTTGCTAAACTGATGGAGGTTCCCAATGCAGAAATTCAAAGGGTGTTGAGATTGAGTTATGATGAATTGGAT 438 0.3653 MRRLRCMKAVVVLDSLNSSKLLENLIGVGRGWLRGGSTVIVTTRNKDVLISGGVDEIYEVQKMNFQNSLRLFSLNAFNKPQAKQGYEEVSKRAVVYAKGIPLVLKVLGSFLHSKSKEEWDSALAKLMEVPNAEIQRVLRLSYDELD 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58582g00001 146 Pfam NB-ARC domain 4 141 IPR002182 GO:0043531
Trme58582g00001 146 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 146 IPR027417 -
Trme58582g00001 146 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 145 IPR044974 GO:0006952
Trme58582g00001 146 Gene3D - 62 146 IPR042197 -
Trme58582g00001 146 PRINTS Disease resistance protein signature 97 111 - -
Trme58582g00001 146 PRINTS Disease resistance protein signature 3 17 - -
Trme58582g00001 146 FunFam Disease resistance protein (TIR-NBS-LRR class) 64 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58582g00001 Trme-Chr58582 188 625 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58582g00001 3 146 WRKY Transcription Factor Family AT5G45050 37.241 2.47e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58582g00001 - - lja:Lj3g3v2692930.1 215.312