Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58579g00001 ATGGAACAGTTACTCGTTCACTGTGCCAATGCAATTGAAACCAACAATGCAACACTAGCACAACGAATCCTTTGGGTCCTTAACAACACAACTCCACAAGATGGTGACTCCAATCAACGCTTAGCCGGAAGCTTCATTCGAGCTCTCGTAAATCGCGCATCCAAAACCGGTAGTTGCAAAATGCTCGAAGCGGTTACAGAAACCGCAAGTAGTTATAACAATCGTAACAACTTCGCTATGCAAATCCACAAATTTTCTGTTATTGAATTAGCAGATTTTGTTGATTTAACACCTTGGCATCGTTTCGGTTTCACAGCAGCTAATTCTACAATTGTAGAAGCTACTAAAGGATTTTCAGTTATTCACATTGTTGATTTGAGTTTAACACATTGCATGCAGATTCCTACTCTAATCGATGCCATTGCTAATCGCGATGAGGTTCCTCCTTTAATCAAGCTCACGGTCGCGGATTGTAGGAATATGAATATTCATATTCCAATTCCACCTTTGCTTGATCTTTCTTACGACGAATTAGGTGCAAAATTGGTTAATTTTGCTAAATCAAAAAACGTGATTATGGAATTCAAAGCGGTTTCTTCAACTTATGCAGACGGATTCGCTTCATTGATCGAACATCTACGCGTGCAAGTGCAACATTATACTAAAACTCATGAAGCATTGGTTATAAACTGTCACATGATGCTTCATTATATTCCTGACGAAACTCTTAATGATACGAATATGAATTCAAACTCTTCTTCGTCATTGCGATCAATGTTTCTAGAAGCTTTACGGAGTTTAGATCCAACAATTGTCGTTTTAGTGGATGAAGACGCGGAATTAACATCGAATGATTTG 858 0.3846 MEQLLVHCANAIETNNATLAQRILWVLNNTTPQDGDSNQRLAGSFIRALVNRASKTGSCKMLEAVTETASSYNNRNNFAMQIHKFSVIELADFVDLTPWHRFGFTAANSTIVEATKGFSVIHIVDLSLTHCMQIPTLIDAIANRDEVPPLIKLTVADCRNMNIHIPIPPLLDLSYDELGAKLVNFAKSKNVIMEFKAVSSTYADGFASLIEHLRVQVQHYTKTHEALVINCHMMLHYIPDETLNDTNMNSNSSSSLRSMFLEALRSLDPTIVVLVDEDAELTSNDL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58579g00001 286 ProSiteProfiles GRAS family profile. 1 286 IPR005202 -
Trme58579g00001 286 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 278 IPR005202 -
Trme58579g00001 286 Pfam GRAS domain family 1 284 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58579g00001 1 286 GRAS Transcription Factor Family AT3G49950 55.052 1.03e-102 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme58579g00001 GRAS 3.6e-55 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58579g00001 - - mtr:11421838 451.825