Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58526g00001 ATGGTGAAGGTGATACAGCAGAGTCAAGTTGCACCACCACCCGGGTTACTTCCATCACCAACCACACTCCCCCTCACCGTCTTCGACACTCCATGGTTTTACTGCCAATACCCCATTAAACGAATATTCTTCTACCACTTCCCTCATCCAACTCATTACTTCCTTCAAACAACACTTCCTATTCTCAAACACTCTCTTTCCTTAACCCTCCAACACTTCTTCCCCTTCTCCTCCAACCTTGTTATCCCTTCAGATTCCCAAACTGCCCCTTACATACGTTACCTCAGCAGCACCAACGCTCTCTCTTTCACCGTAGCTGAATCCGCAGCAGACTTCAACCTCCTCATTTCTGATTCACAAGATGCTCAAAACTGGCACCCTCTTGTTCCAGATTTGTCTTCGTCAAGTACTGAACAGAACAGCACACGAGTCATTCCAATAATGGCCATACAAGTCACCGTTATGCCAAACTCTGGTTTATCTATCTGTCTCGCGTTCAAACATGTGGCTGCAGACGGAAAATCACTTCACCATTTCATGAAATTTTGGCCTCTGTTTCAAAAAACAGAGCAAACAACAAAAACAATTCGTCTTTTGAACACTCTCTCTGCCTCTTGA 618 0.4498 MVKVIQQSQVAPPPGLLPSPTTLPLTVFDTPWFYCQYPIKRIFFYHFPHPTHYFLQTTLPILKHSLSLTLQHFFPFSSNLVIPSDSQTAPYIRYLSSTNALSFTVAESAADFNLLISDSQDAQNWHPLVPDLSSSSTEQNSTRVIPIMAIQVTVMPNSGLSICLAFKHVAADGKSLHHFMKFWPLFQKTEQTTKTIRLLNTLSAS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58526g00001 205 PANTHER - 2 190 - -
Trme58526g00001 205 Pfam Transferase family 17 190 - -
Trme58526g00001 205 Gene3D - 1 201 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58526g00001 Trme-Chr58526 226 843 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58526g00001 42 183 Monolignol Biosynthesis Gene Families AT5G48930 25.517 1.23e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58526g00001 - - tpra:123894645 300.827