Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58409g00001 GGATGCGATGCTTCTGTGCTGCTAAACTCAAAAGGAAGCAACAAAGCAGAAAAAGATGGACCACCAAATGTTTCTCTGCATGGATTCTTTATCATTGATAATGCAAAGAAAGCAGTAGAAGCTGCTTGCCCTGGTGTAGTCTCTTGTGCTGATATCCTAGCACTAGCAGCAAGAGATGCTGTATTTCTGTCTGGAGGTCCAGGTTGGGATGTTCCTAAAGGAAGAAAAGATGGAACAATATCCAAGGCCAGTGAAACAATACAGTTACCATCACCAACCTTCAACATATCACAACTACAGAAGAGCTTCTCTCAAAGAGGTCTCTCAATGGAAGACTTGGTAGCTTTGTCAGGTAACAAATTTCCAAGCCCAAAACTTCACCATTTACTTTTTTTTTAA 399 0.411 GCDASVLLNSKGSNKAEKDGPPNVSLHGFFIIDNAKKAVEAACPGVVSCADILALAARDAVFLSGGPGWDVPKGRKDGTISKASETIQLPSPTFNISQLQKSFSQRGLSMEDLVALSGNKFPSPKLHHLLFF 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58409g00001 132 Pfam Peroxidase 1 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme58409g00001 132 Gene3D - 1 110 - -
Trme58409g00001 132 PRINTS Plant peroxidase signature 27 40 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme58409g00001 132 PRINTS Plant peroxidase signature 46 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme58409g00001 132 PRINTS Plant peroxidase signature 65 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme58409g00001 132 PRINTS Plant peroxidase signature 111 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme58409g00001 132 PRINTS Haem peroxidase superfamily signature 47 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme58409g00001 132 PRINTS Haem peroxidase superfamily signature 65 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme58409g00001 132 PANTHER PEROXIDASE 25-RELATED 1 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme58409g00001 132 SUPERFAMILY Heme-dependent peroxidases 1 118 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme58409g00001 132 ProSiteProfiles Plant heme peroxidase family profile. 1 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme58409g00001 132 FunFam Peroxidase 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58409g00001 Trme-Chr58409 343 888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58409g00001 1 118 Peroxidase AT5G42180 79.661 1.17e-65 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58409g00001 K00430 - qsa:O6P43_033577 217.624