Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58393g00001 CAATCAGATATCATCGGAAGAGAAGACAATAAAAATGAGATTATAAGCTTGTTGAGGCAATCACATGAAAATCAACATATCTCTGTGGTTGCTATTGTTGGGATTGGTGGTTTGGGAAAGACAGCTCTCGCTCAATTGGTATACAATGATGGTGAAGTAACAAAGGTTTTTGACAAGAGTATGTGGGTATGTGTCTCTGATAACTTTGATGTCAACATTATCATTAGGAAAATGTTGGAGTTATTAACCAATAGCAAAATTGACGATAAATTATCACTGGAAAGCTTGCAAAACATGCTTCGTGTCAATTTAACTAATAAGAGATACTTGTTAGTCCTAGACGATCTTTGGAACGAGAGTTTTGAAAAATGGACTCAATTGAGAACTTATTTGATGTGTGGTGCTGAGGGTAGTAAGGTTGTAGTGACAACTCGTTCTAAAGTTGTAGCGCAAACAATGGGTGTAAGTGTCCCTTATACTTTGAATGGTTTGACTCTGGAGAAATCTTGGAGTTTGTTGAAGAACGTCATTACATGTGGGGATGAGATCAAAGAAGTGAACCAAACTCTTGAATCAATTGGTAAGAAGATATCAAAAAAGTGCGGTGGTGTTCCACTGGCAATCAGAACACTAGGAGGCCTACTACAGGTTACCAAAACTTGTCGCCTCAACAGAGACAATGTTTTGCCTACTGCTCGTTATATCCCAAGGATTGGGAAATACAGAAGGACGAGCTGA 738 0.3848 QSDIIGREDNKNEIISLLRQSHENQHISVVAIVGIGGLGKTALAQLVYNDGEVTKVFDKSMWVCVSDNFDVNIIIRKMLELLTNSKIDDKLSLESLQNMLRVNLTNKRYLLVLDDLWNESFEKWTQLRTYLMCGAEGSKVVVTTRSKVVAQTMGVSVPYTLNGLTLEKSWSLLKNVITCGDEIKEVNQTLESIGKKISKKCGGVPLAIRTLGGLLQVTKTCRLNRDNVLPTARYIPRIGKYRRTS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58393g00001 245 FunFam Probable disease resistance protein At1g61300 1 158 - -
Trme58393g00001 245 PRINTS Disease resistance protein signature 201 215 - -
Trme58393g00001 245 PRINTS Disease resistance protein signature 29 44 - -
Trme58393g00001 245 PRINTS Disease resistance protein signature 103 117 - -
Trme58393g00001 245 Gene3D - 1 157 IPR027417 -
Trme58393g00001 245 Gene3D - 164 229 IPR042197 -
Trme58393g00001 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 217 IPR027417 -
Trme58393g00001 245 PANTHER DISEASE RESISTANCE PROTEIN RP 15 216 IPR044974 GO:0006952
Trme58393g00001 245 Pfam NB-ARC domain 7 221 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58393g00001 Trme-Chr58393 1 835 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58393g00001 27 212 WRKY Transcription Factor Family AT5G45050 29.648 2.77e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58393g00001 - - mtr:25480111 308.145