Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5831g00001 CGAAAATTATGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCTAATGGACACAAGAAGTCAACAATACTGGGAGCTAGCTCAGAGCACAAGAATGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCAAATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCCAAGAAAGCTCAAGCCAATTGGGTCGTCTTTGATAAACATCTCAAGCATGAAGAAAAACAATGCATGGAAGAGCTTCAGTGTAATATTGCAGGTATGAAGGGTTCCCAACCGAAGGTACTCCGCTTCAATTTGGTAGGATCGCAAACGAAGGATCTTGAAGAAACTTGTTCATTACCTTCTGAGCAGCACGAGATGCCTGGAAAACAATCAAAGAAGAAGAATGTTTCTTTGAAATCTACAATAGGACAAGTTGTCACGCCAACTAGCAGCCCCGAGTTAGAGACATCATTTACTGCAACTGAAGTTGGAACTTCATCGGTTTCAAGCTCCGATCCTGGAACTTCACCATTTTTTGTCTCTGAGATCATTGCCGAGTCAAAGAAAGAGGAAACTATCATAGAAAATCAAGAAACTGACGGTACTATCTCTGACACAGACAGTGAAAATTTGTCCACATCTTCAGCAAGCTTGAGATTTCAGCCGTGGATTACAGATCTATTTTTGCATAAACAATCATCTCAACGTGAAGAAGAAAGGTCAGAGAGTTCTCGTTCTCATGATAGGCTTGAAACGTCTACAACTAGAGCTTTGCTAGAAAAATTCTCTAGGCTTGACAGAGAAGCCGAAATTGAAACCTCGACCTTTAAGACTGACTTGGAATTCAGTGGAAGTATAAGAGAAGTGGTAGCATTATCTAGAAATGCCGCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCTCCAGTTTTTGGAAAACCTCCAAGATGGTTCAGCTATGCTGAGTTGGAGCTAGCTACTTGTGGATTTTCACCGGCCAATTTCTTGGCAGAAGGAGGATATGGATCTGTTCACAGAGGAGTTCTACCAGAAGGGCAAGTTATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTCTGCTCGGAGGTTGAAGTCCTGAGTTGTGCTCAGCACCGAAATGTTGTTATGTTGATCGGGTTCTGTATAGAGGATAAGAGAAGGTTATTGGTTTATGAATACATATGCAATGGATCATTGGATACTCATCTATATGGTAATTTCTTTTTACTTCCATACCAAATGATGTCATGA 1329 0.4123 RKLWGFPRFAGDCANGHKKSTILGASSEHKNDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKAQANWVVFDKHLKHEEKQCMEELQCNIAGMKGSQPKVLRFNLVGSQTKDLEETCSLPSEQHEMPGKQSKKKNVSLKSTIGQVVTPTSSPELETSFTATEVGTSSVSSSDPGTSPFFVSEIIAESKKEETIIENQETDGTISDTDSENLSTSSASLRFQPWITDLFLHKQSSQREEERSESSRSHDRLETSTTRALLEKFSRLDREAEIETSTFKTDLEFSGSIREVVALSRNAAPGPPPLCSICQHKAPVFGKPPRWFSYAELELATCGFSPANFLAEGGYGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDTHLYGNFFLLPYQMMS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5831g00001 442 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 316 419 - -
Trme5831g00001 442 MobiDBLite consensus disorder prediction 242 263 - -
Trme5831g00001 442 ProSiteProfiles Protein kinase domain profile. 344 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme5831g00001 442 Pfam Protein tyrosine and serine/threonine kinase 350 430 IPR001245 GO:0004672|GO:0006468
Trme5831g00001 442 Gene3D Phosphorylase Kinase; domain 1 316 419 - -
Trme5831g00001 442 PANTHER OS01G0750732 PROTEIN 95 429 - -
Trme5831g00001 442 SUPERFAMILY Protein kinase-like (PK-like) 320 434 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5831g00001 Trme-Chr5831 426 1929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5831g00001 325 430 Trihelix Transcription Factor Family AT1G26150 50.000 3.01e-30 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Trme5831g00001 PK_Tyr_Ser-Thr 3.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5831g00001 - - gmx:100789216 703.745