Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58307g00001 AGTCCTTCTGAGAGAGGTAGTTCACATTTTTCGCTTACCGAGATAAAAAAGAAATTAAAGAATGCTATAGGAAGGGAGAGACATGGAAAAGGCATCGGTAAAGACAATGTTGGAATGAGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATCGCAAGACCTTCAACTGGTGTTACTAAAGGAAACAAGACTGGTAAGAATAAAGATTCGGAAGCGGTTGTGGATCGTGAAAAGGGTAATGAAGATGAGAACACGGACTCGTCAAGTAGGCTAACTTCCAAAACGCTCGGAAGAATAATATCTTTTCCTGATTACAACTTTTCTCCACTTAACAGTCCTGTAAGGGATTGGGAGGATCGTTTTGTGACCGCAAAGAGGAGACTTCATGGTGAAAGCTATAACAGTAAGTCACAAGAAATTAAGTCAGACTCGAATTTCTCAGACGGTATAATTAGCGGTGATAAAGAGGAAAATAGGGATGAGATAGTTACTGAAGGTGATGTAGAATCTACAAAAGACGTAACTATTATAGAATCTTCCTCGGAACCAGTTGGCCTCAGTGTAGGAAATGAGGAACAAAGCCATAATATTTCCGAAAGTTCTGATTGTGCAGGATTTTCTCAATGTTTGGAGCAGGTAGTATCTCTGTCTGCACTACAATTTTACATAAATTAA 678 0.3835 SPSERGSSHFSLTEIKKKLKNAIGRERHGKGIGKDNVGMRSPNKDHFFIEKIARPSTGVTKGNKTGKNKDSEAVVDREKGNEDENTDSSSRLTSKTLGRIISFPDYNFSPLNSPVRDWEDRFVTAKRRLHGESYNSKSQEIKSDSNFSDGIISGDKEENRDEIVTEGDVESTKDVTIIESSSEPVGLSVGNEEQSHNISESSDCAGFSQCLEQVVSLSALQFYIN 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58307g00001 225 MobiDBLite consensus disorder prediction 65 89 - -
Trme58307g00001 225 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 3 215 - -
Trme58307g00001 225 MobiDBLite consensus disorder prediction 23 42 - -
Trme58307g00001 225 MobiDBLite consensus disorder prediction 133 154 - -
Trme58307g00001 225 MobiDBLite consensus disorder prediction 51 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58307g00001 Trme-Chr58307 2 855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58307g00001 4 197 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 34.653 4.29e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58307g00001 - - tpra:123883590 384.03