Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58269g00001 AGGATATTGCAAGACATCATCAATGATCACAGAAGCAGTCACGAAGATGAAGATCTAGTTGATGTTCTTCTCAAGTTTCAGCATGGTGGTAATAATGATCCCTTGCAACATCACTTGACTGATGACAATATTAAAGCAGTTATACAGGACTTGTTCACTGCTGGTAGCGAAACATCCTCAGGGATTGTGTTATGGGCGATGTCTGAGATGGTAAAGAATCCAATGGTGATGAAAGAAGCACAAGCTGAGGTAAGAAGAGTGTTTGACAGAAAGGGGTATGTGGATGAGACAGGGTTGCACCATTTGATATACTTAAAGTCTATCATCAAAGAAACACTGAGACTACACCCTGTCGTACCATTGCTGGTTCCAAGAGAGAGTAGAGAGAAAAGTCGAATCAATGAGTATGAGATCCCACCTAAGACAAGGGTTGCTGTCAACNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNAGAGTTTTAAACCTGAAAG 503 0.3777 RILQDIINDHRSSHEDEDLVDVLLKFQHGGNNDPLQHHLTDDNIKAVIQDLFTAGSETSSGIVLWAMSEMVKNPMVMKEAQAEVRRVFDRKGYVDETGLHHLIYLKSIIKETLRLHPVVPLLVPRESREKSRINEYEIPPKTRVAVNXXXXXXXXXXXXXXXSFKPE 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58269g00001 167 PANTHER OS08G0105600 PROTEIN 2 167 - -
Trme58269g00001 167 Pfam Cytochrome P450 3 148 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58269g00001 167 PRINTS P450 superfamily signature 107 118 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58269g00001 167 PRINTS P450 superfamily signature 54 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58269g00001 167 PRINTS E-class P450 group I signature 43 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58269g00001 167 PRINTS E-class P450 group I signature 63 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58269g00001 167 PRINTS E-class P450 group I signature 106 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58269g00001 167 SUPERFAMILY Cytochrome P450 2 149 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme58269g00001 167 Gene3D Cytochrome P450 1 167 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58269g00001 Trme-Chr58269 143 893 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58269g00001 1 167 Cytochrome P450 AT3G26210 40.476 9.08e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58269g00001 - - vvo:131615740 199.904