Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58182g00001 ATGGTGGTTAATGAGTTTCAACATCTACTATGGTTTGCACTTGCTATTGCTACCAACAGTTGTGCATGGTTAACCACTGCCATTCTTGTGACAAACATGAGAAATTTCCCTGTCAGTAGAGGTACAGTTGCAGGAATATTGAAAGGTTATGGAGGGATCAGTGCTGCAGTTTTCACCGAAATCTACAGGGCACTTCTTCATAATTCTTCTTCTAATTTCCTCTTGTTTCTTGCTGTCGGCATTCCTGTTTTGTGCTTCACTGTTATGTTTCTCATTCGTCCTTGTACACCGGTTTCTGGTGAGAATTCCTCAGAAAAATGGCATTTTGTTTTCATTCAATGTTCAAGTGTGGCTTTAGGTGTATATTTACTTGTAACAACCACACTTGATTACATTCTTCACATAAATTCCACTGTGTCTTATGCTTTGGTGGCTTTGATGATTCTTCTTCTCATGGCTCCTCTTGCTATCCCT 474 0.3966 MVVNEFQHLLWFALAIATNSCAWLTTAILVTNMRNFPVSRGTVAGILKGYGGISAAVFTEIYRALLHNSSSNFLLFLAVGIPVLCFTVMFLIRPCTPVSGENSSEKWHFVFIQCSSVALGVYLLVTTTLDYILHINSTVSYALVALMILLLMAPLAIP 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58182g00001 158 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 158 - -
Trme58182g00001 158 Pfam Nodulin-like 9 158 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58182g00001 Trme-Chr58182 48 713 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58182g00001 9 158 Nodulin-like Gene Family AT1G80530 56.000 1.70e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58182g00001 - - gmx:100787328 211.846