Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58087g00001 ATGGAAACCGCAACCACCCTCACCGGACTCCTCCAAGCCGTCGCCAAAAAATTCCCTTCCCGACGTGCCATCTCCGTCGCCGGAAAACTCGACCTCACTCACTCTCACCTCAATCATCTAGTCGAATCCGCCGCAAATCATCTCATCTCCGCCGGAATCAAACCTAACGACGTCGTCGCTCTCACCTTCCCTAACACCGTCGAGTACGTAATACTATTTTTGGCCGTTATTCGAGTACGAGCCACGGCGGCGCCGTTGAACGCGGCTTACACATCAGAAGAATTTGAGTTTTATTTATCAGACTCTGAATCGAAGCTTCTATTAACGCCGTTAGAAGGTAACGAACCGGCTCAAGCCGCAGCTACAAAGCTCAAAATTCAACTCGGCTCAGCTTCGCTCATCAAAACCACTGAAGAAGAAGAAACTAAATTTTCATTTTCAATCTCGTTGAACAAACCCGAGTCAGAGTCAGATTTAAATTCTGTTAACTCAGTTAACTCGGTTTCCGAACTCATTAACGAACCATCCGACGTGGCACTTTTCCTCCACACATCAGGAACAACGAGTCGACCTAAGGGGGTCCCACTGAGTCAACACAACTTAGTTTCGTCTGTTAGAAACATTGAATCGGTTTATCGACTCAGTGAGTCAGACTCGACGGTTATTGTGCTTCCGCTTTTCCATGTTCATGGGTTAATTGCCGGGTTATTGAGTTCACTTGGTGCCGGAGGTGCGGTGGCGTTACCATCGGCGGGAAGATTCTCGGCGTCGACGTTTTGGAAAGATATGATTCAATACAATGCCACGTGGTATAC 815 0.4798 METATTLTGLLQAVAKKFPSRRAISVAGKLDLTHSHLNHLVESAANHLISAGIKPNDVVALTFPNTVEYVILFLAVIRVRATAAPLNAAYTSEEFEFYLSDSESKLLLTPLEGNEPAQAAATKLKIQLGSASLIKTTEEEETKFSFSISLNKPESESDLNSVNSVNSVSELINEPSDVALFLHTSGTTSRPKGVPLSQHNLVSSVRNIESVYRLSESDSTVIVLPLFHVHGLIAGLLSSLGAGGAVALPSAGRFSASTFWKDMIQYNATWYT 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58087g00001 272 Gene3D - 2 272 IPR042099 -
Trme58087g00001 272 PANTHER ACYL-COA SYNTHETASE 5 272 - -
Trme58087g00001 272 SUPERFAMILY Acetyl-CoA synthetase-like 5 271 - -
Trme58087g00001 272 Pfam AMP-binding enzyme 12 270 IPR000873 -
Trme58087g00001 272 ProSitePatterns Putative AMP-binding domain signature. 181 192 IPR020845 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58087g00001 5 269 Monolignol Biosynthesis Gene Families AT4G05160 27.758 2.53e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58087g00001 K22133 - gmx:100817853 369.392