Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme580726g00001 ATGGCTTCTGGTTATGGAAAAGGTGATAAAGATAAAGAGATTGTTTCGCCTCGTGATAGTGACGGACATGGAACTCATACGGCGAGCACCGCCGCGGGATCTCACGTCGGAAACGCTAGTTTCCTCGGTTACGCTACTGGAACAGCGAGAGGTATGGCTCCTCAAGCGCGTGTTGCCGCTTACAAAGTTTGTTGGACTGAC 201 0.5124 MASGYGKGDKDKEIVSPRDSDGHGTHTASTAAGSHVGNASFLGYATGTARGMAPQARVAAYKVCWTD 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme580726g00001 67 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 65 IPR045051 -
Trme580726g00001 67 MobiDBLite consensus disorder prediction 1 20 - -
Trme580726g00001 67 Gene3D Peptidase S8/S53 domain 7 66 IPR036852 GO:0004252|GO:0006508
Trme580726g00001 67 MobiDBLite consensus disorder prediction 1 33 - -
Trme580726g00001 67 Pfam Subtilase family 11 65 IPR000209 GO:0006508|GO:0008236
Trme580726g00001 67 ProSiteProfiles Serine proteases, subtilase domain profile. 1 67 - -
Trme580726g00001 67 SUPERFAMILY Subtilisin-like 15 66 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme580726g00001 Trme-Chr580726 67 267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme580726g00001 1 66 Subtilisin-like Serine Gene Family AT2G05920 74.242 6.71e-25 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme580726g00001 - - mnt:21410024 106.686