Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58038g00001 ATGGCAACATGGAAAGTTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCGTCTGAATTGGCATCTGTGACCTGTTTGGAGTTAGGCGAAATATGTAGAGAAGTTGGCCTTCCTCCTGGTGTCTTAAATATTCTCTCTGGATTAGGCCATGAAGCTGGTGCTTCTTTAGCATCTCATCCTGACGTAGATAAGATTGCCTTTACTGGTAGCTCTGCAACTGGGAGCAGGATTATGACAGCTGCGGCGCAGCTAATCAAGCCTGTTTCACTCGAGCTTGGTGGAAAGAGYCCAATCMTTGTTTTYGAGGATGTTGAMCTTGATAAGGGTTRGTGTGCCTTCTCAAATATGTCTAGTTTGTGA 369 0.4553 MATWKVAPALAAGCAAILKPSELASVTCLELGEICREVGLPPGVLNILSGLGHEAGASLASHPDVDKIAFTGSSATGSRIMTAAAQLIKPVSLELGGKSPIJVFEDVXLDKGXCAFSNMSSL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58038g00001 122 SUPERFAMILY ALDH-like 1 111 IPR016161 GO:0016491
Trme58038g00001 122 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 93 100 IPR029510 GO:0016491
Trme58038g00001 122 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 121 IPR016162 GO:0016491
Trme58038g00001 122 Pfam Aldehyde dehydrogenase family 1 111 IPR015590 GO:0016491
Trme58038g00001 122 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58038g00001 Trme-Chr58038 193 866 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58038g00001 1 111 Aldehyde Dehydrogenase Gene Family AT1G74920 81.982 7.62e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58038g00001 K00130 - gmx:100170731 195.282