Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme58031g00001 ATGGCACATGTCGAATCATTGTTATGCACTGGATCAGCTGATGTACGGATTATTGGTATTTGGGGTATGGGTGGTATAGGCAAGACAACCATTGCAGAGGCTATATATACAAAAGTCTCTTCTCAATACGAGGGATGCTACTTCGCTGCCAATGTGAGGGAAAATTGGGAATATTCTAGAAAAAACGAGTTACGGACAAAACTTCTGGCTGGTGTATTAGGGGACCAAAACCTGGATATTAGCACCCCTACTATAAGTTCCACTTTTGTTGTAGGAAGGCTTCGACGTAAAAAGCTTCTCATTGTTCTCGATGACATAAGTGATTCCAAACAAATAGAATATCTTGTTGGCGAGAAAGATTGGTTTGGACCTGGTAGTCGAATCATAGTGACGACCAGAAATAAAGAAGTGTTTAACAGTGGAGTTGATGAATTATACCAAGTGAAGGTATTGAATTCTCATGAATCACTAAAGCTTTTTAGCTTGAATGCCTTTCAACAAGACCATCCAATGAGGGAATACCAACACTTGTCAGACAGGGCAGTAGATTATGCTAAGGGCANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNCCAAACGACCAAAAGAATGGGAGAGTGCACTGGAGAAACTGAAGAAAATTCCCAAAGCTGAAATTTATGATGTTTTAAGATTTAGTTATGAAGGATTAGATCCAGAAGAGCAGAATATATTTTTAGATATTGCCTGCTGTTTGAAAGGAGAAACGAAATGCAGTATAACAAGAATATTAGACGGCTGCGGTTTTTCTACCGAAATTGGGATGAGAAGCCTTGCAGATAAGTCTCTTGTAACCATTTCCAAAGGCAACGAGGTACAGATGCATGATC 877 0.3786 MAHVESLLCTGSADVRIIGIWGMGGIGKTTIAEAIYTKVSSQYEGCYFAANVRENWEYSRKNELRTKLLAGVLGDQNLDISTPTISSTFVVGRLRRKKLLIVLDDISDSKQIEYLVGEKDWFGPGSRIIVTTRNKEVFNSGVDELYQVKVLNSHESLKLFSLNAFQQDHPMREYQHLSDRAVDYAKGXXXXXXXXXXXXXXKRPKEWESALEKLKKIPKAEIYDVLRFSYEGLDPEEQNIFLDIACCLKGETKCSITRILDGCGFSTEIGMRSLADKSLVTISKGNEVQMHD 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme58031g00001 292 PRINTS Disease resistance protein signature 17 32 - -
Trme58031g00001 292 PRINTS Disease resistance protein signature 93 107 - -
Trme58031g00001 292 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 292 IPR044974 GO:0006952
Trme58031g00001 292 Gene3D - 150 234 IPR042197 -
Trme58031g00001 292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 244 IPR027417 -
Trme58031g00001 292 Gene3D - 1 145 IPR027417 -
Trme58031g00001 292 Pfam NB-ARC domain 7 216 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme58031g00001 Trme-Chr58031 21 897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme58031g00001 6 290 WRKY Transcription Factor Family AT4G12020 38.811 1.88e-54 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme58031g00001 - - tpra:123891409 516.924