Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme579987g00001 ATGAGTTTTCAGGACATACAATCCGGCCGCCGAAACCTAACCAACGGCAAACAAGACCCGACGCAAGCGGTGGCTTCCGGCGTATTCCAGATCAACACCGCCGTTTCCACTTTTCAGAGACTCGTTAACACTCTCGGAACCCCCAAAGACACGCCAGAGCTTCGCGAGAAACT 173 0.5376 MSFQDIQSGRRNLTNGKQDPTQAVASGVFQINTAVSTFQRLVNTLGTPKDTPELREKL 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme579987g00001 58 MobiDBLite consensus disorder prediction 1 21 - -
Trme579987g00001 58 Pfam Syntaxin-like protein 25 58 IPR006011 GO:0016020
Trme579987g00001 58 FunFam Syntaxin-22 19 58 - -
Trme579987g00001 58 Gene3D - 7 58 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme579987g00001 1 58 SNARE and Associated Proteins AT5G46860 77.419 4.12e-28 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme579987g00001 - - vvo:131651791 110.923