Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57843g00001 ACTTTGCCAAAAATCTCCAAGGAAGAATTTGAGTTGATATTTGATGAGCTGGATGACACTCATGATGTAAAGATTAACAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTAAGATTCCAGAAGGAGGATGTGAGTTCTTACTTTGACTATTTAGTATTCTACCATTCATCCACCTCAAAGAGATTGAAAGCATTCGTAAAGAGTACCATGTTTGGATACATAGTGACCTTTGTTCTCATATTGAATCTGGTTGCTGTAATTATTGAGACAACGTCTCATCTGATATGA 294 0.3537 TLPKISKEEFELIFDELDDTHDVKINKDEFADICNAIALRFQKEDVSSYFDYLVFYHSSTSKRLKAFVKSTMFGYIVTFVLILNLVAVIIETTSHLI 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57843g00001 97 ProSiteProfiles EF-hand calcium-binding domain profile. 5 40 IPR002048 GO:0005509
Trme57843g00001 97 SUPERFAMILY EF-hand 5 51 IPR011992 -
Trme57843g00001 97 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 1 93 IPR044581 GO:0005245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57843g00001 1 93 Ion Channels AT4G03560 67.021 8.99e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57843g00001 K16900 - gmx:100806160 158.688