Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57812g00001 ATGCATGTAGGTGGGATTGTAAATAACACATTGCGGCCAGCCATTCCAAGCCACTGCGATCTCGAATGGAGAACACTGATGGAGCAATGTTGGGCACCGAATCCTGTAGCCAGGCCTTCCTTCACAGAAATTGCAAGTCGCTTGCGCATAATGTCCGCAGCAGCTAGTCAAACTAAGCCACAGGGAAACAAGCCATCTAAATGA 204 0.4902 MHVGGIVNNTLRPAIPSHCDLEWRTLMEQCWAPNPVARPSFTEIASRLRIMSAAASQTKPQGNKPSK 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57812g00001 67 Gene3D Transferase(Phosphotransferase) domain 1 2 67 - -
Trme57812g00001 67 SUPERFAMILY Protein kinase-like (PK-like) 7 55 IPR011009 -
Trme57812g00001 67 Pfam Protein tyrosine and serine/threonine kinase 7 48 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme57812g00001 Trme-Chr57812 398 601 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57812g00001 3 67 MAP Kinase Kinase Kinase AT1G16270 71.642 3.22e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Trme57812g00001 PK_Tyr_Ser-Thr 6.1e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57812g00001 - - tpra:123895538 137.887