Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57807g00001 ATGGAAGTCCAAGCTTTGGCAGCCTTGGGTTCCCATGAGAACATTGTGGGGTATTACACTTCATGGCTTGAAAATGAACAGTTGTACATTCAGATGGAGATATGTGATCATAGCTTATCCGTAAAGAAAGGTTCTGAGTTTTTAGCAGAAGGTCAAGTGTTAGAAGCTTTATATCAGGTTGCTAATGCACTGCAATTTATGCATGAGAAAGGAATAGCTCATCTTGATGTTAAACCTGATAATATTTATGTCAAAAATGGTGTTTATAAGCTTGGTGATTTTGGATGTGCAACTCTTATTGATAGTAGCCTGCCAATTGAGGAAGGAGATGCTCGTTATATGCCCCAGGAAATCCTTAACGATAATTATGATCACCTTGACAAGGTTGATATTTTCTCCCTGGGAGCTTCTATTTATGAACTTGTTCGGAAATCGCCTTTGCCAGAATCAGGAGGTCATTTTTTGAATCTTAAAGAGGGCAAGTTACCACTCCTGCCCGGTCATTCATTGCAATTCCAAAACTTGCTCAAG 531 0.3936 MEVQALAALGSHENIVGYYTSWLENEQLYIQMEICDHSLSVKKGSEFLAEGQVLEALYQVANALQFMHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLIDSSLPIEEGDARYMPQEILNDNYDHLDKVDIFSLGASIYELVRKSPLPESGGHFLNLKEGKLPLLPGHSLQFQNLLK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57807g00001 177 ProSiteProfiles Protein kinase domain profile. 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme57807g00001 177 Pfam Protein kinase domain 2 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme57807g00001 177 ProSitePatterns Serine/Threonine protein kinases active-site signature. 72 84 IPR008271 GO:0004672|GO:0006468
Trme57807g00001 177 Gene3D Transferase(Phosphotransferase) domain 1 36 177 - -
Trme57807g00001 177 FunFam Wee1-like protein kinase 34 177 - -
Trme57807g00001 177 SUPERFAMILY Protein kinase-like (PK-like) 2 174 IPR011009 -
Trme57807g00001 177 SMART serkin_6 1 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme57807g00001 177 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 2 165 - -
Trme57807g00001 177 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57807g00001 1 177 Core Cell Cycle Gene Families AT1G02970 73.743 4.73e-94 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Trme57807g00001 Pkinase 9.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57807g00001 K06632 - gmx:547742 318.546