Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme577986g00001 ATGGGCTTGCCTGCTTGTGTTAAGAAATTGGGCATGGTGCCTGGTCTCATTGCTATACTGTTAACGGCCTTATTGACAGAGAAGTCGATTGAGTTCATGATCAGGTTTTCGAGGGCTGGAAATCTTACTTCCTATGGAAGTCTTATGGGGGATGCTTTTGGGAGATATGGAAAAGCACTTGTGGAGATATGTGTTGTAATCAATAACACTG 211 0.4313 MGLPACVKKLGMVPGLIAILLTALLTEKSIEFMIRFSRAGNLTSYGSLMGDAFGRYGKALVEICVVINNT 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme577986g00001 70 PANTHER AMINO ACID TRANSPORTER 1 69 - -
Trme577986g00001 70 Pfam Transmembrane amino acid transporter protein 2 69 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme577986g00001 Trme-Chr577986 17 227 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme577986g00001 1 69 Amino Acid or Auxin Permease AAAP Family AT5G38820 46.377 8.97e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme577986g00001 K14207 - mtr:25495473 119.783