Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme577907g00001 ATGGTGAGGTTTGAAGATGTCACTGCGACATCCCTCACTGTTATTTTGTGTTTGGAAGATCCTTCTGGAGAAAATAATGCTGGTTATGGTGTGTGGCATCGCAAAGCTGATGATGTGAACTATCCATTTGACCCAACTTGCACAAATCTCCTACCAAATAGAAGACTTGACATCAGGGATTTACTTCCAGCTACAGAATACAGTTTCAAAGTTGTTTCCAATGATTTGAGG 231 0.4069 MVRFEDVTATSLTVILCLEDPSGENNAGYGVWHRKADDVNYPFDPTCTNLLPNRRLDIRDLLPATEYSFKVVSNDLR 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme577907g00001 77 Coils Coil 73 77 - -
Trme577907g00001 77 PANTHER VIN3-LIKE PROTEIN 2-RELATED 2 73 IPR044514 GO:0010048|GO:0040029
Trme577907g00001 77 CDD FN3 2 72 IPR003961 GO:0005515
Trme577907g00001 77 SUPERFAMILY Fibronectin type III 2 72 IPR036116 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme577907g00001 2 73 PHD Gene Family AT4G30200 53.425 1.36e-18 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme577907g00001 - - gmx:100819331 121.709