Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57687g00001 ATGCAACCTTCACTAGGTCACCATCTAGAGGAACCACCTTATGTTCCTTCTCAGAATTATCCTCCCAATCTCCGCCAGCCACCATCTCAGTCACCTAGTGGACCTCCTCCACCTTCCCAACAGTATTATGGGACACCGCCCCAAGGATATGAACCACCATCGAGTAGATCTGGTTCAAATTATTCTTCTGGATATGGTACATTATCTGGGCCTGCTGAGCCATATCGATATGGCGGGCCACCTCAGTATGGTAGTAAACAACCACAACTACCCACTGCTTCGGTGGCTTCCACCGGTGGAAGTGGTTACCCACAGCTCCCTACTGCCCGCCCACTCCCACAAGCAATACCTACTGCATCTGCAGTAAGTGGTGGTTCTGGTTCAGGTTCTCCTGGATCTGGTAACAGGGTTTCTGTCGATGATGTAGTTGATAAAGTTGCTACTATGGGATTCCCTAGAGACCATGTGAGGGCAACAGTTCGGAAGCTGACAGAGAATGGTCAATCAGTTGACCTAAATACAGTGCTGGATAAGCTTATGAATGAAGGTGGTGGTGAAATGCAGCAACA 569 0.4903 MQPSLGHHLEEPPYVPSQNYPPNLRQPPSQSPSGPPPPSQQYYGTPPQGYEPPSSRSGSNYSSGYGTLSGPAEPYRYGGPPQYGSKQPQLPTASVASTGGSGYPQLPTARPLPQAIPTASAVSGGSGSGSPGSGNRVSVDDVVDKVATMGFPRDHVRATVRKLTENGQSVDLNTVLDKLMNEGGGEMQQ 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57687g00001 189 MobiDBLite consensus disorder prediction 44 67 - -
Trme57687g00001 189 Pfam UBA-like domain (DUF1421) 139 182 IPR010820 -
Trme57687g00001 189 MobiDBLite consensus disorder prediction 85 104 - -
Trme57687g00001 189 MobiDBLite consensus disorder prediction 15 43 - -
Trme57687g00001 189 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 8 186 - -
Trme57687g00001 189 MobiDBLite consensus disorder prediction 1 140 - -
Trme57687g00001 189 MobiDBLite consensus disorder prediction 119 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme57687g00001 Trme-Chr57687 1 569 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57687g00001 38 187 Trihelix Transcription Factor Family AT5G14540 56.051 2.33e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57687g00001 - - gmx:100778494 249.98