Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57639g00001 ATGATACCAGTGCAACTTCTGTGGGTGAATTTGGTCACCGATGGTCCACCCGCAACAGCTCTTGGTTTCAACCCTGCTGATGTTGATATTATGCAGAAGCCACCTCGAAAAAGTGACGACGCTCTTATAAGTGCTTGGGTTCTTTTCCGTTACCTAGTAATAGGTTCCTATGTGGGAATTGCAACAGTTGGCATTTTTGTCTTGTGGTACACACAAGCATCTTTTCTTGGGATGAATCTTGTTAGTGATGGACACACAGTTATAGAATTGTCACAGCTTCTCAACTGGAGGGAATGTCCATCATGGTCTAATTTCACCGTTTCTTCATTTGACGCTGGTGGCGGTCGCTTGATCACATTTTCAAATCCCTGCGACTATTTTTCAGTTGGAAAAGTCAAGGCCATGACACTTTCTCTCTCTGTCTTGGTGGCAATTGAGATGTTTAATTCTTTGAATGCTCTCTCAGAAGAGAATAGCTTAAGGACATTACCACCTTGGAGAAACCCTTGGCTTTTGGTAGCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNTGGTTTTTGGTGATTCTGATATCAGCACCTGTTATTCTTATTGATGAGATTCTAAAATTAGTGGTGAGGAGTCAAAGGAGGAAGACAAAACAGAAAGAAGCATGA 717 0.3682 MIPVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRKSDDALISAWVLFRYLVIGSYVGIATVGIFVLWYTQASFLGMNLVSDGHTVIELSQLLNWRECPSWSNFTVSSFDAGGGRLITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRTLPPWRNPWLLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWFLVILISAPVILIDEILKLVVRSQRRKTKQKEA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57639g00001 238 Gene3D - 1 234 - -
Trme57639g00001 238 Pfam Cation transporting ATPase, C-terminus 1 225 IPR006068 -
Trme57639g00001 238 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 230 IPR023298 -
Trme57639g00001 238 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 1 231 - -
Trme57639g00001 238 PANTHER CALCIUM-TRANSPORTING ATPASE 2 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme57639g00001 Trme-Chr57639 6 887 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57639g00001 1 236 Primary Pumps ATPases(2) AT4G00900 66.109 1.36e-102 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57639g00001 K01537 - gmx:100792952 369.777