Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme575602g00001 CCACCTTTCAATGCTGCATCTCTTTTGGATCCAAGGCGATTGCCGTCCCAGAAACATAAAAGGATGGGAGAAACGTCAAGAAGAAGTTTTTCTGAACGAGACAAATTCACCGGAAGGACGAAGGTTTACACAGTAGCTGAGGTTGAGTTGGTTACTAACAACTTCAGTGAAGACAACCTTCTGGGAGTAGGCTCTCTTGGCCCTGTTTACAGAGCTGAGTTACCAGATAACAAGGTATAA 240 0.4458 PPFNAASLLDPRRLPSQKHKRMGETSRRSFSERDKFTGRTKVYTVAEVELVTNNFSEDNLLGVGSLGPVYRAELPDNKV 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme575602g00001 79 MobiDBLite consensus disorder prediction 13 33 - -
Trme575602g00001 79 Gene3D Phosphorylase Kinase; domain 1 15 79 - -
Trme575602g00001 79 MobiDBLite consensus disorder prediction 1 33 - -
Trme575602g00001 79 SUPERFAMILY Protein kinase-like (PK-like) 32 77 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme575602g00001 Trme-Chr575602 1 240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme575602g00001 12 78 Strubbelig Receptor Gene Family AT5G06820 46.269 1.39e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme575602g00001 - - tpra:123896060 155.606