Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57374g00001 GTTGCTGCAACTACCATTGATCGTCAATTTATTGATAAGGTCATTCTTGGAAATGGAAAGACATTTATTGGTAAGTCAATTAATACTATCCCCTCAAATGGAACAAAATTTCCAATAGCTGTGCGTAATGCTAAATCTTGCCAATTTGCAAATGTAACTCCTGAAATATGTGGTTGTATGGACAAAAATATGGTAAGGGGTAAGCTTGTTTTGTGTGGAGAACCAGGGGGTGAAGTATTGGCTTATATGAATGGTGCAATTGGTTCTATCGTTCAAGTTGCAAAATCTCAAAATGAATTTTCTCAGATCACGGTAAAACCTTCACTTAACTTGGATCCAGAAGACTATGTTCATGTTCAATCTTACACAAATTCCACTAAATACCCTGTAGCTGAAATTTTGAAGAGTGAAACTTTCCATGACAACAATGCTCCGAGAATTGCCATTTTCTCTTCTCGTGGCCCAAATTCTTTGGTTCCAGAAATTATGAAACCAGATATAAGTGCCCCGGGAGTGGATATCTTGGCTGCATATTCACCTTTAGCACCACCTTCAGGGGATCCGGATGACAAAAGAAAGGTCAAATACAACATAATATCTGGAACTTCTATGGCATGTCCCCATGTTGCTGGAGTTGCTGCATATGTGAAATCATTTCATCCAAATTGGTCACCTGCAGCTATCAAATCTGCCATTATGACCACAGCGAAACCAATAAATGGTACTTATAATGATATGGCAGGTGAGTTTGCTTATGGATCTGGGAATGTCAATCCACATCAAGCTGTTCACCCTGGACTTGTTTATGACATCACTAAGCAAGATTATGTGCAAATGCTTTG 842 0.3884 VAATTIDRQFIDKVILGNGKTFIGKSINTIPSNGTKFPIAVRNAKSCQFANVTPEICGCMDKNMVRGKLVLCGEPGGEVLAYMNGAIGSIVQVAKSQNEFSQITVKPSLNLDPEDYVHVQSYTNSTKYPVAEILKSETFHDNNAPRIAIFSSRGPNSLVPEIMKPDISAPGVDILAAYSPLAPPSGDPDDKRKVKYNIISGTSMACPHVAGVAAYVKSFHPNWSPAAIKSAIMTTAKPINGTYNDMAGEFAYGSGNVNPHQAVHPGLVYDITKQDYVQML 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57374g00001 280 Gene3D Peptidase S8/S53 domain 1 276 IPR036852 GO:0004252|GO:0006508
Trme57374g00001 280 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 280 IPR045051 -
Trme57374g00001 280 Pfam Subtilase family 97 255 IPR000209 GO:0006508|GO:0008236
Trme57374g00001 280 CDD PA_subtilisin_like 14 133 - -
Trme57374g00001 280 ProSitePatterns Serine proteases, subtilase family, serine active site. 201 211 IPR023828 -
Trme57374g00001 280 ProSiteProfiles Serine proteases, subtilase domain profile. 1 263 - -
Trme57374g00001 280 Gene3D - 7 140 - -
Trme57374g00001 280 SUPERFAMILY Subtilisin-like 1 267 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme57374g00001 Trme-Chr57374 61 902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57374g00001 1 280 Subtilisin-like Serine Gene Family AT5G59190 52.465 1.21e-92 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57374g00001 - - psat:127076787 372.859