Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme571g00001 ATGCTCATGGACCAAGAAATGTCAAAAGAAGTTGTTTCCAAGCACACTCCACCAAATGTGGTTGCAAAATTAATGGGCCTTGAAGCCCTTCCACGGGGAGAACATGGTTTAGCTGTGGAGAGAAGCCCTGGAGGAGATTGTTCTCAGCATATGTGTGGTCATTCTGGGACATCATTCAATCATTGGCAGCTGGAAGATAGGTTTATGGACAAAGAAATGCTTCATGAAGCTCATCCGAGCAGAGAACAGGTTGCTTACAAAGATATTTATGAAATATGGCTCCAATCACAKAGAACAAGCAATGTAAAAGACAAGACACCRGAGAGAGGGAAGTGGGCTGAAGATGTTAATSAGAAGAAAATGGCTCTTATTCGCCAAAAATTCATGGAAGCAAAGCGTCTTTCTACAGATGAGAAATTACGTCAATCGAAGGAGTTTGATGAAGCCTTGGAAGTTTTAAGCTCCAACAACGATCTGTTAATCAAGTTATTGGATTCTCAAAATCTTTATGAACGGCAGTCTACTCCACTGGCTGAGACAAAGCGTATTACTGTTCTTAAACCTTCAAAGATGGTTGACAATGAAAAATTCAGTAGAAAGGGAAACAATGACAAACACATTAAGAAACCATTAAATAATGATGTTGCATGGGAGAAAAATAGTTCTGGATTCTCTCCAGCCAGTCAGAAAGTTGATGAATTCCCTGTTCAACCTACTCGAATAGTGGTATTGAAGCCTAGTTCTGTGAGGGCACATGATATTAATACACTGGTTTCTCCAACGGCGTCATCACCTCAAAATATGCGAAGTGGAAACTTCTATCACGGCCCTGAAGATGATGATGATCTACTGGAATCAAGAAAAGTGGCGGAAGAAATTACACAGCAGATGTATGAACATGAAGACCTGAGGAGCTGTCAAAGAGATGAAACTGTGTATTCTTCAGTATTTTCCACGGGCTATATTGGTGATGACAGTTCATTCTACAAGTCAGATCATGAGTGTACTGCAGGGAATTCTAGTGATTTGGAAGTTATGTCGCCATCTCCCAGACATTCTTGGGATTATGTTAATCGCTGTGGAAGTCCTTATTCTTCATCATCGTTCAGTCGCGCGTCCTGTTCTCCCGAGTCATCAGTATGCAGAGAGGCCAAGAAACGGCTTTCTGAAAGATGGGCCATAATGGCATCTAAGAAAGGTCTTCAAGAGCAAAGACATATGCGGAGAAGCTCTACCTTGGGTGAGATGCTTGCTCTTTCAGATATAAAGAAATCTCTAATATCTGAGTTTGAAGGTATTAATAAAGATGAAGAACCGAGTGAATCTGCTTCTTGCAGTAAAAATTTAAATGAGGAAACATGCACAGATGGTTCTCCTAAAAACCTTCCCAGGTCAAAATCTGTCCCTATATCTCCCACTGTCTATGAAAATGGGCACTACGTTGAAGCTTGTAATAATGATGCTGGTAAAGTACACAGCTCCAAGGAGCTAACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTGCAAGTTTCTTATTCTCAAGGAATAAGAAATCAATCAGGGAAAAATCTTGTTTATCTCATCCTACAGATGACTCCCAATCAACTGCCGCAGAAACATCAGTATCTCCAATAAACTCACCTGAAGTCCTTAGGAATGATGTGTCTCAAAGCTTCAAAGGTCTTGCTAAGTTCTATCCTGAATTGGCAGTGTCAAAGCCCACAGTGACAGGGATATCAAGTGAAAACCAGGATCAGCCAAGTCCAATCTCAGTTTTAGAACCTCCATTTGAAGATGAAAATGCAGCTCATGAGTCCTTGGACTGTATGAAGGGTGGCCAGCTGGGATCACGGGTGTCTCTGAAGTCTAATTTAATTGATAAATCACCACCTATAGAATCAATAGCTCGAACCCTCTCATGGGATGACTCTTGTGCAGAGAAATTACTATCAGCTGCTGGACTTGATGATCTAGTGCAGTCTGACTCGTTTTACTCTAGATGGCATTCCCTTGAAAGTCCATTGGATCCATCATTGAGGGACAAATACGCCAATCTCAACGACAAGGAGCCTCAACCTCTCCACGAAGCAAAGCGAAGGCAGAAGAGATCTAACCAGAAGCTTGTATTCGATTGTGTCAATGTTGCACTAATAGAAATTACTGGTTATGGATCAGAAAGTTCCTTAATGGGCAGGTTGTGGAGTGGGGGCCACGGAAGGCACCAAGTCTCAGAGGGTGCACATACCCTATTGGTGGACCTCATTGTATCCCATATGAAGGAGTTGACATCTAGTGGCATGAGGTCTGTTTGGTGGGGGGATTGTGGGGACAGTAACAGCCTGGTGGTGGAGACTGTTGTCAGAAAAGAGGTCGTGGGTAAAGGGTGGGTTGAGCTTATGGGTTTGGAGATGGATGTTTTGGTGAAGGAAGTAGAGGGGAAGTTGCTAGAAGAACTTGTGGAGGATGCAGTGGTTGATTTGACAGGCAGG 2499 0.4238 MLMDQEMSKEVVSKHTPPNVVAKLMGLEALPRGEHGLAVERSPGGDCSQHMCGHSGTSFNHWQLEDRFMDKEMLHEAHPSREQVAYKDIYEIWLQSXRTSNVKDKTPERGKWAEDVNZKKMALIRQKFMEAKRLSTDEKLRQSKEFDEALEVLSSNNDLLIKLLDSQNLYERQSTPLAETKRITVLKPSKMVDNEKFSRKGNNDKHIKKPLNNDVAWEKNSSGFSPASQKVDEFPVQPTRIVVLKPSSVRAHDINTLVSPTASSPQNMRSGNFYHGPEDDDDLLESRKVAEEITQQMYEHEDLRSCQRDETVYSSVFSTGYIGDDSSFYKSDHECTAGNSSDLEVMSPSPRHSWDYVNRCGSPYSSSSFSRASCSPESSVCREAKKRLSERWAIMASKKGLQEQRHMRRSSTLGEMLALSDIKKSLISEFEGINKDEEPSESASCSKNLNEETCTDGSPKNLPRSKSVPISPTVYENGHYVEACNNDAGKVHSSKELTKSKSMKSSFKGKVASFLFSRNKKSIREKSCLSHPTDDSQSTAAETSVSPINSPEVLRNDVSQSFKGLAKFYPELAVSKPTVTGISSENQDQPSPISVLEPPFEDENAAHESLDCMKGGQLGSRVSLKSNLIDKSPPIESIARTLSWDDSCAEKLLSAAGLDDLVQSDSFYSRWHSLESPLDPSLRDKYANLNDKEPQPLHEAKRRQKRSNQKLVFDCVNVALIEITGYGSESSLMGRLWSGGHGRHQVSEGAHTLLVDLIVSHMKELTSSGMRSVWWGDCGDSNSLVVETVVRKEVVGKGWVELMGLEMDVLVKEVEGKLLEELVEDAVVDLTGR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme571g00001 833 MobiDBLite consensus disorder prediction 532 548 - -
Trme571g00001 833 Pfam Domain of unknown function (DUF4378) 651 825 IPR025486 -
Trme571g00001 833 Pfam DUF761-associated sequence motif 17 31 IPR032795 -
Trme571g00001 833 Pfam Protein of unknown function (DUF3741) 125 168 IPR022212 -
Trme571g00001 833 MobiDBLite consensus disorder prediction 258 281 - -
Trme571g00001 833 MobiDBLite consensus disorder prediction 526 548 - -
Trme571g00001 833 MobiDBLite consensus disorder prediction 437 471 - -
Trme571g00001 833 MobiDBLite consensus disorder prediction 443 471 - -
Trme571g00001 833 MobiDBLite consensus disorder prediction 685 703 - -
Trme571g00001 833 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 650 - -
Trme571g00001 833 MobiDBLite consensus disorder prediction 682 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme571g00001 Trme-Chr571 147 3760 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme571g00001 2 831 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 42.662 1.14e-175 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme571g00001 - - psat:127125933 1357.04