Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57163g00001 ATGCATGTGGCTGGTGACAGGGCACCAGTGAATGCAAAGATGGTTAAAAGTCGTTACACTACTGGTGCTGCTTCCCGGTCTTTCACTTCAACATCATATGACCCAGTTACAAAAAATGATTATGAATATGTGAAAGTTGAGAAGAATCCAAAGAAGAAGGGATATGTAAAACTGCATACAACACATGGTGATTTGAACATTGAGCTGCATTGTGATATAGCGCCCAGGACATGTGAGAACTTTATCACGCTTTGTGAACGTGGATATTATAACGGAGTAGCTTTTCATAGAAGCATTAGGAATTTTATGATACAGGGTGGCGATCCTACTGGTACTGGTAAAGGTGGTGAATCGATTTGGGGAAAACCTTTTAAGGATGAACTCAACTCCAAATTAGCCCACTCTGGGAGGGGTGTGGTTAGCATGGCAAACAGTGGCCCACATACTAATGGTTCCCAGTTTTTCATCTTGTACAAATCTGCAAATCATTTAAACTTCAAACATACAGTTTTTGGAGGAGTAGTTGGTGGCTTGCCTACACTAGCAACAATGGAAAAGGTTCCTGTTGATGACAGTGACCGACCTCTG 588 0.4184 MHVAGDRAPVNAKMVKSRYTTGAASRSFTSTSYDPVTKNDYEYVKVEKNPKKKGYVKLHTTHGDLNIELHCDIAPRTCENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFKDELNSKLAHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLPTLATMEKVPVDDSDRPL 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57163g00001 196 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 36 196 - -
Trme57163g00001 196 SUPERFAMILY Cyclophilin-like 48 196 IPR029000 -
Trme57163g00001 196 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 90 107 IPR020892 GO:0003755|GO:0006457
Trme57163g00001 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 IPR002130 GO:0000413|GO:0003755
Trme57163g00001 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 166 181 IPR002130 GO:0000413|GO:0003755
Trme57163g00001 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 69 84 IPR002130 GO:0000413|GO:0003755
Trme57163g00001 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 95 107 IPR002130 GO:0000413|GO:0003755
Trme57163g00001 196 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 153 165 IPR002130 GO:0000413|GO:0003755
Trme57163g00001 196 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 55 195 IPR002130 GO:0000413|GO:0003755
Trme57163g00001 196 Gene3D - 36 196 IPR029000 -
Trme57163g00001 196 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 59 196 IPR002130 GO:0000413|GO:0003755
Trme57163g00001 196 CDD cyclophilin_RING 55 196 - -
Trme57163g00001 196 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 49 196 IPR044666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme57163g00001 Trme-Chr57163 95 838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57163g00001 1 196 U-box Gene Family AT5G67530 87.245 5.58e-129 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57163g00001 K10598 - zju:112490476 385.185