Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57155g00001 TTAACAAGTGAAGATTCCATGAGTGTGGTGATTCCTAGGAATACTTCAATTCCAACTAGAAAGAAAAGAGTATACTTCACAAGGAATGATTACAAACCCTCTGTCTTGATCAAGATTTACGAGGGTGAGAGGACAAGAGCAAGTGATAACAACTTGTTGGGATTGTTTACTCTTCGCGGCTTCCCTTGTGAACATGCTGATGGAATCTTATCTGTATCCGCTGAGGAAGAAACTACTGGAATTGAGAACAAGATTACCATAATCAATGAGAAAGGAAGATTATCAACTGATCAAATTATGCGTAAGATTCAAGAAGCTGAGAAATATAAGGCTGAAGATAAGAAGCACCAGAAGAAAGTTAATGCAATGAATGCTTTGGATGATTATATTGATGAGATAACGAATGCTATATACGATGTTGATACAAGTGTCAAGATTTGTCCAGAAGATAAATTGAAGATCAGTCTGGCAATTAGAGATGCAAACAAATTACTTGGTGATAGCCAGCAGAAAGAAGCAAATGTGTTTGAGGACTGTTTGAAGGAGCTAGTGAGCATTGTAGAACCCATTATCAAGATTGGCTAG 585 0.3726 LTSEDSMSVVIPRNTSIPTRKKRVYFTRNDYKPSVLIKIYEGERTRASDNNLLGLFTLRGFPCEHADGILSVSAEEETTGIENKITIINEKGRLSTDQIMRKIQEAEKYKAEDKKHQKKVNAMNALDDYIDEITNAIYDVDTSVKICPEDKLKISLAIRDANKLLGDSQQKEANVFEDCLKELVSIVEPIIKIG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57155g00001 194 PANTHER HEAT SHOCK PROTEIN 70KDA 4 149 IPR013126 GO:0005524|GO:0140662
Trme57155g00001 194 Gene3D - 123 193 IPR029048 -
Trme57155g00001 194 Pfam Hsp70 protein 2 191 IPR013126 GO:0005524|GO:0140662
Trme57155g00001 194 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 3 127 IPR029047 -
Trme57155g00001 194 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 122 IPR029047 -
Trme57155g00001 194 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 122 191 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme57155g00001 Trme-Chr57155 3 666 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57155g00001 2 191 Calmodulin-binding Proteins AT3G12580 49.754 4.30e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57155g00001 K03283 - jre:109006783 192.586