Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57130g00001 TTAAGGTCTGCATTTAATTATCTATGGATACCTTATGATACTGTGGACACTTTTCTGCCACGTGGAAGTAAACAAAGACAATGGTATGAAGCAGATATTTGTTGGAAGATTGAGAATGTGATAGCTCATGAAGGAGTTCAAAGAGTTGAGAGAGATGAACCTATAGGAAAATGGGAACAAAGAATGAGAAATGCTAATTTTCAAGGGATTGGTTTTGGTGAGGAATGTGTTGGTGAAGTGAAAGCTATGCTTGATGAACATGCTGCTGGTTGGGGATTGAAGAAAGAAGATGAATGTATTGTGCTTACTTGGAAAGGGCATAATGTTGTTTTTGCTTCTGCTTGGTTACCTGCTTAA 357 0.3782 LRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGVQRVERDEPIGKWEQRMRNANFQGIGFGEECVGEVKAMLDEHAAGWGLKKEDECIVLTWKGHNVVFASAWLPA 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57130g00001 118 Pfam GRAS domain family 2 115 IPR005202 -
Trme57130g00001 118 ProSiteProfiles GRAS family profile. 1 116 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme57130g00001 Trme-Chr57130 107 463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57130g00001 1 117 GRAS Transcription Factor Family AT3G49950 62.185 4.65e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme57130g00001 GRAS 3.7e-26 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57130g00001 - - vvo:131643723 249.21