Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57102g00001 ATGGTTGTTGCTGCTGTAGGCTTCAAGGGAAAAAGACTTGAGATCCCGCGCGAGTTGAATCCCCAAATAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGCCCTTCTTTCGCCAGTATTATGGATTCTCTGAGGTCATTACTCAAACCCCCTACACCTCAACCTGGTCTTCCAAACATACCAAGTCTCACCTGA 207 0.4879 MVVAAVGFKGKRLEIPRELNPQIAAIIEACWANEPWKRPSFASIMDSLRSLLKPPTPQPGLPNIPSLT 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57102g00001 68 Gene3D Transferase(Phosphotransferase) domain 1 1 58 - -
Trme57102g00001 68 Pfam Protein tyrosine and serine/threonine kinase 8 48 IPR001245 GO:0004672|GO:0006468
Trme57102g00001 68 SUPERFAMILY Protein kinase-like (PK-like) 8 61 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme57102g00001 Trme-Chr57102 140 667 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57102g00001 2 64 MAP Kinase Kinase Kinase AT5G03730 71.429 1.89e-25 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trme57102g00001 PK_Tyr_Ser-Thr 1.2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57102g00001 K14510 - tpra:123895552 135.191