Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5709g00001 CTTCCGTTGGCTTTAGAAGTAGTGGGTTCCAACTTGTTTAGCAAGCGTATAGAAGAATGGAAATCTACATTAGATCAATATAAAAAGACCAACAAAGTGATCCAAAAGATACTTAAAGTTAGCTTTGATGGTTTGGAGGAAGATGAAAAACGTGTCTTTCTCGACATTTCTTGTTGTTTCAAAGGTCATACAGTGAAAGAGGTTGAAGATATACTTTCTGCTCATCACGGAGAATATATGAAATATGCCATGAGAGTGTTGGTTCTCATAAAGATCGATTCGACAAATTGTGTGACATTACATGACTTGATAGAGAATATGGGTAAAGTAATAGTCCGGCAAGAATCACCCGAAGAGCCTGGAAAACGCAGTAGGTTGTGGTTCCATAAAGATGCAGTTGAAGTTTTGGAAGCAAATTTGGGAACATCTCAAATTGAGATTATGTATTTGGATATCCCATTATATGAAGAAGTGGTAGAATGGAAAGGAGATGAATTCAAGAAGATGGAAAACCTCAAAACACTCATTATTAAAAACGGTCTCTTTTCCAAAGGTCCTGAACATCTTCCTAATAGTTTAAGAGTATTGGAATGGTCTGGGTATCCTTCACAACATATACCATCTGATTTTTGCCCAAGGAAACTTTCCATATGCAAATTACCAGCGAGTTGCCTTACATTATTTGAGTTGCACGGCTCATTGAAGGCATGTGTAGTGATTTAA 723 0.3693 LPLALEVVGSNLFSKRIEEWKSTLDQYKKTNKVIQKILKVSFDGLEEDEKRVFLDISCCFKGHTVKEVEDILSAHHGEYMKYAMRVLVLIKIDSTNCVTLHDLIENMGKVIVRQESPEEPGKRSRLWFHKDAVEVLEANLGTSQIEIMYLDIPLYEEVVEWKGDEFKKMENLKTLIIKNGLFSKGPEHLPNSLRVLEWSGYPSQHIPSDFCPRKLSICKLPASCLTLFELHGSLKACVVI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5709g00001 240 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 228 IPR044974 GO:0006952
Trme5709g00001 240 Gene3D - 1 46 IPR042197 -
Trme5709g00001 240 SUPERFAMILY "Winged helix" DNA-binding domain 34 137 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5709g00001 Trme-Chr5709 104 1038 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5709g00001 19 224 WRKY Transcription Factor Family AT4G12020 35.426 5.74e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5709g00001 - - lja:Lj0g3v0168689.1 299.671