Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme57081g00001 ATTCCTGTTGGCAGAGCTACTCTTGGACGTATCATGAATGTTATTGGAGAACCTATCGACCACAAAGGCGAATTCAAAACCGAGCATTATTTGCCCATTCACAGAGAAGCTCCTCCTTTTGTTGAGCAAGCAACTGAACAACAAATCCTTGTTACTGGTATCAAGGTTGTTGACCTGCTTGCACCATATCAAAGAGGAGGAAAAATTGGGTTGTTTGGTGGTGCTGGTGTAGGGAAAACTGTGCTTATTATGGAACTTATCAACAATGTTGCAAAGGCTCATGTATCCTAA 291 0.4192 IPVGRATLGRIMNVIGEPIDHKGEFKTEHYLPIHREAPPFVEQATEQQILVTGIKVVDLLAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHVS 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme57081g00001 96 PANTHER ATP SYNTHASE 1 94 - -
Trme57081g00001 96 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 53 92 IPR000194 GO:0005524
Trme57081g00001 96 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 92 IPR027417 -
Trme57081g00001 96 Gene3D - 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme57081g00001 Trme-Chr57081 269 837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme57081g00001 2 77 Primary Pumps ATPases(2) AT1G76030 36.842 2.68e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme57081g00001 K02133 - atri:130821148 182.57