Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5705g00001 ATGCAAGATGTTATTCAACTATTGAACAAGGAACSGCAAAAAAGTACCATAATTGTAGGGATATGGGGGATAAATGGGGTTGGTAAAGCAACAATTGCAAAAGCCACTTACAATCAAATGGGTTGCAGTTTTGAGGGCCAGAGCTTCCTCCAAAATATTAATGAAATTTGTGAAAGTAAAGAAGGCTTAATTTCATTACAGAGACAACTTCTTTCAGACATCAGCAAAAGAACAAAGATACAGATAGATGCAGTTGAATCAGGGAAAGTTGTATTACGTGAAAGACTTCGCCGTAAGAAGATCTTTCTTGTACTTCACAATGTGAATAAATTGGAACAATTGAATGCTTTGTGTGGTAGTCATGATTGGTTTGGTCGTGGAAGTAAAATAATCATCACAACAAGTGATAGACGTTTACTTCGTAGTAGCCCTCAAGTTGACCATATATATAGAATGAAATATATGGACATTACTGAATCTCTTGAGCTTTTTAGTTGGCACGCATTTAAAACTCCGAGTCCTATAGCAAGTTACGCTGACCTTTGTAGAGATGTTGTTGAGTACTGTGGGGGATTGCCTATAGCTCTTGAAGTCATTGGGTCTTTTTTGTTTGATAGATCTTTAATGGAGTCGAAGTTTTTACTGGAGAAACTCAAAACCTTTCCCAACGATATGATAATGAAAAAGCTCAGAACAAACTTTGATGATTTGGATGCTAATGAGAAAAATATATTCCTTGATGTGGCTACTTTATTTATTGGGATGGACAAGGATGATGTAATTCAGACATTAAATTCCTCCGTGGATTTCCCGGAAAATGGAATAACAATCCTTGAAGAGAAGAGYCTTGTAACTATAGATAGCAAGAACAGGATTGGAATGCATACTATGGTACAAGCAATGGGAAGAGAAATCCTAAGGCAAGAGTCGTCGTATATAGATGAGGTATGTTCACTATGA 960 0.3646 MQDVIQLLNKEXQKSTIIVGIWGINGVGKATIAKATYNQMGCSFEGQSFLQNINEICESKEGLISLQRQLLSDISKRTKIQIDAVESGKVVLRERLRRKKIFLVLHNVNKLEQLNALCGSHDWFGRGSKIIITTSDRRLLRSSPQVDHIYRMKYMDITESLELFSWHAFKTPSPIASYADLCRDVVEYCGGLPIALEVIGSFLFDRSLMESKFLLEKLKTFPNDMIMKKLRTNFDDLDANEKNIFLDVATLFIGMDKDDVIQTLNSSVDFPENGITILEEKSLVTIDSKNRIGMHTMVQAMGREILRQESSYIDEVCSL 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5705g00001 319 PRINTS Disease resistance protein signature 95 109 - -
Trme5705g00001 319 PRINTS Disease resistance protein signature 18 33 - -
Trme5705g00001 319 PRINTS Disease resistance protein signature 189 203 - -
Trme5705g00001 319 SUPERFAMILY "Winged helix" DNA-binding domain 226 311 IPR036390 -
Trme5705g00001 319 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 310 IPR044974 GO:0006952
Trme5705g00001 319 Gene3D - 155 238 IPR042197 -
Trme5705g00001 319 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 247 IPR027417 -
Trme5705g00001 319 Gene3D - 1 149 IPR027417 -
Trme5705g00001 319 Pfam NB-ARC domain 2 222 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5705g00001 Trme-Chr5705 644 1603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5705g00001 19 319 WRKY Transcription Factor Family AT5G45050 35.350 2.28e-48 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5705g00001 - - mtr:11408937 345.125