LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trme57053g00001	ATGTGTTCCATGGCAGAGCTTGGCCATTCAAAACTGATCACACTATTGCTCCTCCTCCTCCTTGTAAAAAGTGGCGGGGAATCGTCTTGTGGACCTGACCAACCTCGTGTTAGATTCCCCTTTCAACTAGTCAAGGGTCCACAAGATCGATGTGCTTTTCCTGAGTTTTGCCTATACTGTGATGACAATAAGAACACCATTCTTTCACTCCCAACAACTTCAGGTCCGATCAAATTCCTTGTTGGCTGGATAGAGTACAAACCACAGTCNTGCCTTCCAATGAAGTTCCTCAAACTTAACAGTTCATCATTCTTATCTTATCAATTTTATTCATTACCAGTAACAAATATCACCTTCCTCAACTGCTCTTCAGTTAAGCATCCGCCAGTTAAGCACCTGAGAAGGCAGGATATGTTTAAATGTCCAATTTATGTTTCAAATTCATACGACAGTGTCTTGGAATTAGGCCTTGAATCGTGTACCAAGATGTTTGAAGCCAGAGCATCCGCCAGTGTAGAAGAGCTACCGTATAAGTTGTTGAACTTGAGTTGGCCCAAACCTGATTGTAGCGAGTGCGAAGCCAAAGGCAAGAGGTGTAGATGGAACCAAAACAGCACCAAAGGCGACATTGAATGTTTCGACAGTAATGGAAAACGGATATCAATCCATATTCCAAAATTTCTTATTTTCGTTGCTACAG	700	0.4214	MCSMAELGHSKLITLLLLLLLVKSGGESSCGPDQPRVRFPFQLVKGPQDRCAFPEFCLYCDDNKNTILSLPTTSGPIKFLVGWIEYKPQSCLPMKFLKLNSSSFLSYQFYSLPVTNITFLNCSSVKHPPVKHLRRQDMFKCPIYVSNSYDSVLELGLESCTKMFEARASASVEELPYKLLNLSWPKPDCSECEAKGKRCRWNQNSTKGDIECFDSNGKRISIHIPKFLIFVAT	233

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trme57053g00001	233	PANTHER	RING/U-BOX SUPERFAMILY PROTEIN	12	229	IPR046948	-
	Trme57053g00001	233	Pfam	Wall-associated receptor kinase galacturonan-binding	28	89	IPR025287	GO:0030247

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trme57053g00001	Trme-Chr57053	62	761	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trme57053g00001	28	213	C3H Transcription Factor Family	AT2G46495	29.665	1.51e-11	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trme57053g00001	-		-	mtr:25482287	199.134