Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5703g00001 ATGCATCGGGATGTAAAGCCCCATAATGTAATGATTGACCATGCGCAGCGTAAGCTTCGTCTTATAGATTGGGGGCTTGCAGAGTTCTATCATCCTGGGAAAGAATATAATGTTCGTGTGGCTTCAAG 128 0.4453 MHRDVKPHNVMIDHAQRKLRLIDWGLAEFYHPGKEYNVRVAS 42
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5703g00001 42 Gene3D Transferase(Phosphotransferase) domain 1 1 42 - -
Trme5703g00001 42 ProSiteProfiles Protein kinase domain profile. 1 42 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme5703g00001 42 SUPERFAMILY Protein kinase-like (PK-like) 1 40 IPR011009 -
Trme5703g00001 42 PANTHER CASEIN KINASE II SUBUNIT ALPHA 1 42 IPR045216 GO:0004674|GO:0006468
Trme5703g00001 42 Pfam Protein kinase domain 1 41 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5703g00001 1 33 Receptor kinase-like Gene Family AT2G43700 57.576 5.94e-07 41.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Trme5703g00001 Pkinase 9.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5703g00001 K03097 - msin:131218985 91.6633