Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme569905g00001 ATGGCGACTAATCCACGAATTAACTCACAGATGGCAGCCGGGATTCGTATGGCAAAGCTCAAAAGAATGGAGGGTGATGGGGGAAGCAGTGTTCCAAAAGTTTATCACACTGTTGACAATGATGAGCGTCCTGACACCGCTTTCACCACCGAGAGAGCAAAGAAAACTGGAAAGGCTAATGCCTGTAGCGGGAAAATCTTTGTGACGATTCCA 213 0.4742 MATNPRINSQMAAGIRMAKLKRMEGDGGSSVPKVYHTVDNDERPDTAFTTERAKKTGKANACSGKIFVTIP 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme569905g00001 71 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 1 71 IPR045134 -
Trme569905g00001 71 MobiDBLite consensus disorder prediction 36 52 - -
Trme569905g00001 71 MobiDBLite consensus disorder prediction 22 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme569905g00001 Trme-Chr569905 1 213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme569905g00001 1 71 C2H2 Transcription Factor Family AT5G39550 52.113 2.84e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme569905g00001 K10638 - gmx:100786796 104.375