Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56986g00001 ATGCAATTGAAGATGCAGAATATCGCCGGAGTGAAAAAGGCCGTGGTGGCTTTAGCTACTTCATTAGGTGAAGTTGAGTTTGATCCAAAAGTGATTAGTAAAGAAGAAATTGTTAGTGCAATTGAAGATGCTGGTTTTGAAGCTTCTTTTGTGCAGAGTACTAGTCAAGATGAGATTGTTTTAGGTGTTGTTGGTGTTGTTGATGTTCAGGTTTTGGAGAGTATGTTAAGTGGTTTTAAAGGGGTGAGGCAGTTTCGGTTTGATCCTTTGTTGAGTGAACTTAATGTTGTTTTTGATCCTCAAGTTCTTAGTTCTAGATCATTGTTTGATGGGATTTGTGCAGTTAGTAATGGCAAGTTTAAGGTGCATGTTAGAAGTCCTTATGCCAGAATGGCTTCNAAAGATGGATCAGAGAGTGAAACCATGTTTCGACTTTTTACTTCCAGCTTGTTTCTTAGT 459 0.3813 MQLKMQNIAGVKKAVVALATSLGEVEFDPKVISKEEIVSAIEDAGFEASFVQSTSQDEIVLGVVGVVDVQVLESMLSGFKGVRQFRFDPLLSELNVVFDPQVLSSRSLFDGICAVSNGKFKVHVRSPYARMASKDGSESETMFRLFTSSLFLS 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56986g00001 153 SUPERFAMILY HMA, heavy metal-associated domain 5 53 IPR036163 GO:0046872
Trme56986g00001 153 Gene3D - 2 50 - -
Trme56986g00001 153 ProSiteProfiles Heavy-metal-associated domain profile. 1 49 IPR006121 GO:0046872
Trme56986g00001 153 CDD HMA 5 49 IPR006121 GO:0046872
Trme56986g00001 153 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 4 152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56986g00001 5 153 Primary Pumps ATPases AT5G44790 59.868 1.45e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56986g00001 K17686 - gmx:100798164 208.379