Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56928g00001 ATGAAGTTAAGCAAGTGTCAATCCTTAAAGCAAGTACCTGACATGTCTGGTGCTCCGAATTTGAAGAAACTGCATCTTGATTCCTGCAAGAGTTTAGTTAAGGTTCATAATTCTGTTGGCTTCCTCGAAAAACTTGAAGATTTGAATCTTAATTGTTGCACCAGTCTGATGGTTCTTCCCCGTGGCATCAACCTACCTTCTCTTAAAACCATGTCACTTAGGAATTGTACAACTCTCAAGAATTTTCC 248 0.3911 MKLSKCQSLKQVPDMSGAPNLKKLHLDSCKSLVKVHNSVGFLEKLEDLNLNCCTSLMVLPRGINLPSLKTMSLRNCTTLKNFP 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56928g00001 83 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 83 - -
Trme56928g00001 83 MobiDBLite consensus disorder prediction 1 20 - -
Trme56928g00001 83 Gene3D Ribonuclease Inhibitor 1 83 IPR032675 -
Trme56928g00001 83 SUPERFAMILY L domain-like 2 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56928g00001 Trme-Chr56928 1 248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56928g00001 1 83 WRKY Transcription Factor Family AT4G12020 38.554 1.41e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56928g00001 - - mtr:120580583 129.413