Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56919g00001 ATGGGAATGAAGATGACCTCAACAACGTTTGCATCTGCCACAGTTAATGTCCTTCCAGCTATTACTTTTATAATGGCACTCACTTTCAGGTTGGAGTCGGTGAATTGGAAAAAATTTCACAGCGTAGCCAAAGTAATTGGAACGGTTATAACCGTTTCAGGAGCTATGGTTATGACTTTATACAAAGGCCCTGCCTTTCAAATCATAAAGGGAGGAGGAGCCATCGACCACCACGGAGGTGCCGCCAGTGACGAACCATCTGACCAAAATTGGGTGATGGGCACAATAATGCTCATATCAAGTTGTGGTAGTTGGGCTGGATTCTTTATTTTGCAA 336 0.4375 MGMKMTSTTFASATVNVLPAITFIMALTFRLESVNWKKFHSVAKVIGTVITVSGAMVMTLYKGPAFQIIKGGGAIDHHGGAASDEPSDQNWVMGTIMLISSCGSWAGFFILQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56919g00001 112 PANTHER WAT1-RELATED PROTEIN 1 112 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56919g00001 Trme-Chr56919 133 883 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56919g00001 1 112 Nodulin-like Gene Family AT1G44800 58.929 5.16e-40 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56919g00001 - - gmx:100811114 181.8