Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56911g00001 ATGTCTGAAAAAACCGTTGAAATGGACATGGTTGCAACACCAAGTAGAAGCAACTACAATTTGGGCCTAATGGGCCAAGAGTTTCATGAAGCAAGCCCAAGATTCAGTAGGCAGTCTCAAAGACCACCTAGCCCAGGTAGGCCCAGCTATATGGCTCCAACTCAATCTGCAAAGGCTAAGGTTAGGGCTGAAGGCCCATTTAAGCANNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGGTTATTGGATCGGGCTGTGACTCGTCTAGCTCGGGTGGTGGAACGGCGTCTATTTACCAGTTTCCAAAAAGCCCGGGCCCAAATGTTATCGGAGTTCGTTCGGAGTCTAGCCGGATTGTGGGTGGTAGTCAAGACTACACTGAGGATTGGGCC 408 0.4412 MSEKTVEMDMVATPSRSNYNLGLMGQEFHEASPRFSRQSQRPPSPGRPSYMAPTQSAKAKVRAEGPFKXXXXXXXXXXXXXXXXXVIGSGCDSSSSGGGTASIYQFPKSPGPNVIGVRSESSRIVGGSQDYTEDWA 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56911g00001 136 MobiDBLite consensus disorder prediction 83 136 - -
Trme56911g00001 136 MobiDBLite consensus disorder prediction 89 107 - -
Trme56911g00001 136 MobiDBLite consensus disorder prediction 1 67 - -
Trme56911g00001 136 Pfam Protein of unknown function (DUF4005) 36 65 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56911g00001 Trme-Chr56911 1 408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56911g00001 1 66 IQD Protein Family AT3G49260 45.455 4.77e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56911g00001 - - gmx:100798026 124.02