Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56870g00001 ATGGATCCCAAAGACNGCAACAGCCAACCAACTGGTTCATGGCACAACATTACTGAATGCCTTACTAAATTTCTCAATATTTTGAAAGAAAATTATGTGCCTCCCGTTCTAATTCAAAAGGTATTTAATCAGACGTTTCAATACATCAACGCAGAAATCTTTAACAGCCTTATATTGCATAAAGAATGTTGCACACTCAACAATGGAGAATATGTAAAATCAGGGTTAGCTGAACTAGAACAATGGTGTAATGAAGTAACCGAAGAGTATGCTGGCACATCTTTGGATGAACTCAACCATGCAAAACAAGCAGTTAGATTCATG 324 0.3673 MDPKDXNSQPTGSWHNITECLTKFLNILKENYVPPVLIQKVFNQTFQYINAEIFNSLILHKECCTLNNGEYVKSGLAELEQWCNEVTEEYAGTSLDELNHAKQAVRFM 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56870g00001 108 PANTHER DILUTE DOMAIN-CONTAINING PROTEIN YPR089W 10 91 - -
Trme56870g00001 108 Pfam DIL domain 41 107 IPR002710 -
Trme56870g00001 108 ProSiteProfiles Dilute domain profile. 1 108 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56870g00001 Trme-Chr56870 88 813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56870g00001 7 108 Myosins gene family AT4G28710 60.784 1.46e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56870g00001 K10357 - gmx:100791031 170.244