Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56828g00001 AGTCCTTCTGAGAGAGGTAGTTCACATTTTTCGCTTACCGAGATAAAAAAGAAATTAAAGAATGCTATAGGAAGGGAGAGACATGGAAAAGGCATCGGTAAAGACAATGTTGGAATGAGATCTCCTAATAAAGATCATTTCTTCATTGAAAAAATCGCAAGACCTTCAACTGGTGTTACTAAAGGAAACAAGACTGGTAAGAATAAAGATTCGGAAGCGGTTGTGGATCGTGAAAAGGGTAATGAAGATGAGAACACGGACTCGTCAAGTAGGCTAACTTCCAAAACGCTCGGAAGAATAATATCTTTTCCTGATTACAACTTTTCTCCACTTAACAGTCCTGTAAGGGATTGGGAGGATCGTTTTGTGACCGCAAAGAGGAGACTTCATGGTGAAAGCTATAACAGTAAGTCACAAGAAATTAAGTCAGACTCGAATTTCTCAGACGGTATAATTAGCGGTGATAAAGAGGAAAATTATTGTCCTGTTCGGGATGAGATAGTTACTGAAGGTGATACAGAATCTACAAAAGACGTACCTATTATAGAATCTTCCTCAGAACCAGTTGGCCTCAGTGCAAGAAATGAAGAACAAAGCCATAATATCTCCGAAAGTTCGGATTGTGCGGGATTTTCTCAATGTTTGGAGCAGGTAGTATCTCTGTCTACACTACAATTTTACATAAATTAA 690 0.3855 SPSERGSSHFSLTEIKKKLKNAIGRERHGKGIGKDNVGMRSPNKDHFFIEKIARPSTGVTKGNKTGKNKDSEAVVDREKGNEDENTDSSSRLTSKTLGRIISFPDYNFSPLNSPVRDWEDRFVTAKRRLHGESYNSKSQEIKSDSNFSDGIISGDKEENYCPVRDEIVTEGDTESTKDVPIIESSSEPVGLSARNEEQSHNISESSDCAGFSQCLEQVVSLSTLQFYIN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56828g00001 229 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 3 217 - -
Trme56828g00001 229 MobiDBLite consensus disorder prediction 22 51 - -
Trme56828g00001 229 MobiDBLite consensus disorder prediction 65 89 - -
Trme56828g00001 229 MobiDBLite consensus disorder prediction 22 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56828g00001 Trme-Chr56828 2 867 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56828g00001 4 119 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 42.742 8.60e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56828g00001 - - tpra:123883590 378.637