Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56778g00001 TTGAAAGCTATTCATGCTGCCAAAGAGAAAGAAAAGCTTGAAGATGCTCTGAATGGTTCCATGCCTCAGAACCGAATGTTCACATGGGATGAAATAGTTTCAGCTGAGTCATCTTTCTCTGAAGATCTGAGAATTGGAATTGGTGCATACGGAATGGTGTATAAGTGCACTTTGCATCACACAACTGTTGCTGTTAGAATTCTCCACTCTAATGGATACCATAAAAGCAAGCAATTCCAGCAAGTGTTAGAGATACTGAGCAGATTGCATCAGCTCTTTCCTTTCTTCACAGCTCAAAGCAACAACCTATCATCTATTGCAATTCGATACTTGCAAACATCTTACTTGGTGGGTAACCTTATCAGCAAGATTGGTGATGTCGGTGTTTCTACAATCCTCAATTCAGATGATTTATTTACCATGTATAAGGACGCAGCGCCTGTTGGAACACTCAGCCACATTGATCACGAGAATCAGAGGGATGGTGTAATTTCTACAAAATTTGATGTTTATGCTTTTGGATTAGTGATCTTACAGTTACTAACGGCAAAACGGGCTTGTAAGGTGGGGATTTCCCCCACTTATAAACTTATGTTCAGACCTTATATCTATTCCATGTGA 621 0.3994 MKAIHAAKEKEKLEDALNGSMPQNRMFTWDEIVSAESSFSEDLRIGIGAYGMVYKCTLHHTTVAVRILHSNGYHKSKQFQQVLEILSRLHQLFPFFTAQSNNLSSIAIRYLQTSYLVGNLISKIGDVGVSTILNSDDLFTMYKDAAPVGTLSHIDHENQRDGVISTKFDVYAFGLVILQLLTAKRACKVGISPTYKLMFRPYIYSM 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56778g00001 206 Gene3D Phosphorylase Kinase; domain 1 8 93 - -
Trme56778g00001 206 Gene3D Transferase(Phosphotransferase) domain 1 115 199 - -
Trme56778g00001 206 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme56778g00001 206 PANTHER OS02G0152300 PROTEIN 1 90 - -
Trme56778g00001 206 SUPERFAMILY Protein kinase-like (PK-like) 21 187 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56778g00001 Trme-Chr56778 100 881 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56778g00001 2 186 U-box Gene Family AT4G25160 41.079 4.47e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56778g00001 - - gsj:114409387 197.208