Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56728g00001 ATTCCCCCAACACAAGATCTAGCAGAATCATCGATAGAATTAGAAATCATGGCAGCATCACCAGCATACCAAGTACATCTTCCAACATCACCAGAATGGTTAAACAAAGGNGACAACGCATGGCAAATGACAGCAGCAACACTTGTTGGTCTTCAAAGCATGCCAGGATTAGTAATTCTCTATGCAAGCATAGTGAAAAAAAAATGGGCAGTGAATTCAGCTTTCATGGCACTTTATGCTTTTGCAGCAGTTTTAATCTGTTGGGTTCTTGTTGCTTATAGAATGGCATTTGGTGATCAACTATTACCCTTTTGGGGTAAAGGAGCACCAGCTTTAGGACAAAAGTTTCTTGTTGCAAGAGCAAAAGTACCTGAAAGTACTCACTATTTCAAGAATAGTGATGTTGTTGAAACACCAATGGAAGAACCTTTTTTTCCTATGGCTTCACTTGTTTATTTTCAGTTTACTTTTGCTGCTATTACTATGATTTTGTTGGCTGGTTCTGTTCTTGGAAGGATGAATATTAAAGCTTGGATGGCTTTTGTTCCTCTTTGGCTTATTTTTTCTTATACTGTTGGTGCTTTTAGTCTTTGGGGTGGTGGATTTCTTTACCATTGGGGTGTTATTGATTACTCTGGTGGCTATGTTATTCATCTCTCTTCTGGAATTGCTGGTTTCACTGC 683 0.3865 IPPTQDLAESSIELEIMAASPAYQVHLPTSPEWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVAYRMAFGDQLLPFWGKGAPALGQKFLVARAKVPESTHYFKNSDVVETPMEEPFFPMASLVYFQFTFAAITMILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56728g00001 228 SUPERFAMILY Ammonium transporter 33 227 - -
Trme56728g00001 228 Gene3D Ammonium transporter AmtB like domains 17 228 IPR029020 -
Trme56728g00001 228 Pfam Ammonium Transporter Family 40 228 IPR024041 GO:0008519|GO:0016020|GO:0072488
Trme56728g00001 228 PANTHER AMMONIUM TRANSPORTER MEP2 26 228 IPR001905 GO:0008519|GO:0016020|GO:0072488
Trme56728g00001 228 FunFam Os01g0831300 protein 26 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56728g00001 Trme-Chr56728 224 906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56728g00001 147 228 Inorganic Solute Cotransporters AT2G38290 90.244 9.60e-46 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56728g00001 K03320 - gmx:100798599 382.489