Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5659g00001 AGGGCAGCCACTGAAGGACGAACGGTTGAACAACAAGTTCTTGAATCAAATCCAGTTTTGGAAGCATTTGGAAATGCTAAAACTGTCAGGAATAACAATTCCAGGCAAGTCTTCCTTGCATATGAGCATCGTTTTGGTAAGTTTGTTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGCGCAGCTATTCGTACTTACCTTCTTGAGAGATCTCGTGTTTGCCAAGTTAATGATCCGGAACGCAACTACCACTGCTTTTATCTTCTTTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGACATCCTAAAACTTTTCATTACCTTAACCAGTCAAAATGCTTTGAACTGGCTGATATAAGTGATGCTCGTGAGTATCTTGCCACCAGGAGAGCTATGGATATTGTTGGAATAAGCGCAAAAGAGCAGGAAGCAATTTTCAGAGTTGTTGCTGCAATTCTTCATATTGGTAATATTGACTTTGCCAAAGGAAAGGAAGTTGATTCATCAGTTCCAAAAGATGATAAATCCAAATTCCACTTAAAAACAACTGCTGAGCTCCTCATGTGTGATGTAGATGCCTTGGAAGATGCATTATGTAAGAGGGTCATGGTCACCCCTGAGGAAATTATAAAACGGAGCCTTGATCCCCAAAGTGCAGCAGTCAGCAGAGATGGATTCGCAAAAACAATTTATTCTAGGCTTTTTGACTGGTTGGTGGACAAGATTAATAATTCAATTGGACAAGATGCCAATTCTAAATGTTTGATCGGAGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATCTAACAGTTTTGAGCAGTTCTGCATTAATTTTACAAATGAGAAGTTGCAGCAGCATTTCAATCAGGCAAAATCTCAGACAAGATAA 903 0.3909 RAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSRQVFLAYEHRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEEIEKYKLGHPKTFHYLNQSKCFELADISDAREYLATRRAMDIVGISAKEQEAIFRVVAAILHIGNIDFAKGKEVDSSVPKDDKSKFHLKTTAELLMCDVDALEDALCKRVMVTPEEIIKRSLDPQSAAVSRDGFAKTIYSRLFDWLVDKINNSIGQDANSKCLIGVLDIYGFESFKSNSFEQFCINFTNEKLQQHFNQAKSQTR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5659g00001 300 PANTHER MYOSIN 2 295 - -
Trme5659g00001 300 FunFam Myosin heavy chain 82 137 - -
Trme5659g00001 300 PRINTS Myosin heavy chain signature 259 287 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme5659g00001 300 PRINTS Myosin heavy chain signature 18 45 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme5659g00001 300 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 295 IPR027417 -
Trme5659g00001 300 Gene3D - 82 140 - -
Trme5659g00001 300 FunFam Myosin 2 142 259 - -
Trme5659g00001 300 Gene3D Myosin VI head, motor domain, U50 subdomain 142 252 - -
Trme5659g00001 300 Pfam Myosin head (motor domain) 5 295 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme5659g00001 300 Gene3D Kinesin motor domain 5 268 IPR036961 -
Trme5659g00001 300 ProSiteProfiles Myosin motor domain profile. 1 300 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trme5659g00001 300 Gene3D - 269 295 - -
Trme5659g00001 300 SMART MYSc_2a 1 300 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5659g00001 Trme-Chr5659 2 1850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5659g00001 1 294 Myosins gene family AT1G08730 88.776 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5659g00001 K10357 - gmx:100816792 535.413