Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme565763g00001 ATGTCGCACGAGATAAGATCACCACTGTCTGGTGTTGTTAGCATGGCTGAAGTTCTTTCCACCACAAAACTTGATAGGGAACAAAGAGAGCTCTTGAATGTCATGTTATCGTCGGGTGATATGGTTCTTCAAATTATAAATGACATACTTGATCTTTCCAAG 162 0.4012 MSHEIRSPLSGVVSMAEVLSTTKLDREQRELLNVMLSSGDMVLQIINDILDLSK 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme565763g00001 54 Pfam His Kinase A (phospho-acceptor) domain 1 54 IPR003661 GO:0000155|GO:0007165
Trme565763g00001 54 SMART HisKA_10 1 54 IPR003661 GO:0000155|GO:0007165
Trme565763g00001 54 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 1 54 IPR036097 GO:0000155|GO:0007165
Trme565763g00001 54 PANTHER HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J 1 54 - -
Trme565763g00001 54 ProSiteProfiles Histidine kinase domain profile. 1 54 IPR005467 -
Trme565763g00001 54 CDD HisKA 1 54 IPR003661 GO:0000155|GO:0007165
Trme565763g00001 54 Gene3D - 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme565763g00001 Trme-Chr565763 16 177 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme565763g00001 1 54 Histidine Kinase Gene Family AT5G10720 87.037 5.52e-27 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme565763g00001 - - qsa:O6P43_015811 100.138