Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme56520g00001 ATGGGGGGAGGATCTTCCGACGAGGAAAATTTAGGCACACGCTGGAAGGAATGCTCTGAAATACTTAAAAGCTGTCTACAATGTATCATTCTTCCAATTGGAAGCTTACCAGTTGGCCTTTGTGTCCATCGAGCATTGCTGTTTAAAGTGTTAGCAGATTTAATTAACCTACCGTGTCGAATTGCTAAGGGCTGCAAGTATTGTAGAAAGGACATGGGTGCTTCTTGTATAGTACAATTTGGTTCTGACAG 251 0.4223 MGGGSSDEENLGTRWKECSEILKSCLQCIILPIGSLPVGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDMGASCIVQFGSD 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme56520g00001 83 Pfam Ethylene-responsive protein kinase Le-CTR1 1 81 - -
Trme56520g00001 83 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme56520g00001 Trme-Chr56520 266 850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme56520g00001 8 83 MAP Kinase Kinase Kinase AT5G03730 64.474 6.37e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme56520g00001 K14510 - gmx:100807496 160.999