Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme5641g00001 GGGTACATGGCACCGGAGTATGCTGTTGATGGATTGTTTTCAGTGAAATCTGACGTTTTTAGCTTCGGAATTTTATTATTGGAGATTATATGTGGCAAAAGAAATAGAGCATATTATCACACAGATGGAACTCTTAACCTTGTTGGCCAAGCATGGTCAGTATGGAAAGAGAATAGAGCATTAGAGTTGATTGACACAAACATAGGTGAGACTTTTGTTGTATCGGAAGTGTTGCGTTGTATGCACGTTAGTCTCTTGTGTGTACAGCAGAATCCTGAAGATAGGCCTACAATGGCCTCTGTGATTCTAATGTTGGGGAGTACTGAGATGGAATTAGGGGAACCTAAAGAACCTGGTTTCATTTCAAAAAATGTTTCAACAGAGTCAAATTCATCGACCAATGCAAAGGATTGTAGTTCAGTAAATGAAGTGACCATTTCCTTATTAGATGCTAGATGA 459 0.39 GYMAPEYAVDGLFSVKSDVFSFGILLLEIICGKRNRAYYHTDGTLNLVGQAWSVWKENRALELIDTNIGETFVVSEVLRCMHVSLLCVQQNPEDRPTMASVILMLGSTEMELGEPKEPGFISKNVSTESNSSTNAKDCSSVNEVTISLLDAR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme5641g00001 152 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme5641g00001 152 MobiDBLite consensus disorder prediction 122 137 - -
Trme5641g00001 152 MobiDBLite consensus disorder prediction 116 137 - -
Trme5641g00001 152 Pfam Protein tyrosine and serine/threonine kinase 2 103 IPR001245 GO:0004672|GO:0006468
Trme5641g00001 152 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 152 - -
Trme5641g00001 152 SUPERFAMILY Protein kinase-like (PK-like) 1 129 IPR011009 -
Trme5641g00001 152 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 110 - -
Trme5641g00001 152 Gene3D Transferase(Phosphotransferase) domain 1 1 126 - -
Trme5641g00001 152 Pfam Domain of unknown function (DUF3403) 107 152 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme5641g00001 Trme-Chr5641 303 849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme5641g00001 1 152 Receptor kinase-like Gene Family AT4G23150 43.949 1.92e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme5641g00001 PK_Tyr_Ser-Thr 5.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme5641g00001 - - gmx:100802962 211.075